Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCER1Q8TC90 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCER1Q8TC90 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCER1Q8TC90 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCER1Q8TC90 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCER1Q8TC90 AC005229.1-201ENST00000392885 409 ntBASIC21.52■■□□□ 1.04
CCER1Q8TC90 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCER1Q8TC90 RN7SL837P-201ENST00000463010 287 ntBASIC21.52■■□□□ 1.04
CCER1Q8TC90 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC21.52■■□□□ 1.04
CCER1Q8TC90 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC21.52■■□□□ 1.04
CCER1Q8TC90 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CCER1Q8TC90 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.52■■□□□ 1.04
CCER1Q8TC90 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCER1Q8TC90 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC21.52■■□□□ 1.04
CCER1Q8TC90 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCER1Q8TC90 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCER1Q8TC90 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCER1Q8TC90 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCER1Q8TC90 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CCER1Q8TC90 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC21.52■■□□□ 1.04
CCER1Q8TC90 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC21.52■■□□□ 1.04
CCER1Q8TC90 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCER1Q8TC90 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CCER1Q8TC90 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCER1Q8TC90 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCER1Q8TC90 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CCER1Q8TC90 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCER1Q8TC90 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCER1Q8TC90 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCER1Q8TC90 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCER1Q8TC90 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CCER1Q8TC90 WDR53-203ENST00000429115 683 ntTSL 2 BASIC21.51■■□□□ 1.03
CCER1Q8TC90 C2orf27AP3-201ENST00000434123 579 ntBASIC21.51■■□□□ 1.03
CCER1Q8TC90 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC21.51■■□□□ 1.03
CCER1Q8TC90 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC21.51■■□□□ 1.03
CCER1Q8TC90 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.51■■□□□ 1.03
CCER1Q8TC90 COX5BP1-201ENST00000507622 393 ntBASIC21.51■■□□□ 1.03
CCER1Q8TC90 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC21.51■■□□□ 1.03
CCER1Q8TC90 SLC25A47P1-201ENST00000531577 414 ntBASIC21.51■■□□□ 1.03
CCER1Q8TC90 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
CCER1Q8TC90 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.51■■□□□ 1.03
CCER1Q8TC90 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCER1Q8TC90 AC244669.2-201ENST00000612320 853 ntBASIC21.51■■□□□ 1.03
CCER1Q8TC90 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC21.51■■□□□ 1.03
CCER1Q8TC90 AL354718.3-201ENST00000616414 581 ntBASIC21.51■■□□□ 1.03
CCER1Q8TC90 CR382287.1-201ENST00000623954 586 ntBASIC21.51■■□□□ 1.03
CCER1Q8TC90 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCER1Q8TC90 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC21.51■■□□□ 1.03
CCER1Q8TC90 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCER1Q8TC90 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC21.51■■□□□ 1.03
CCER1Q8TC90 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCER1Q8TC90 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CCER1Q8TC90 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC21.51■■□□□ 1.03
CCER1Q8TC90 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCER1Q8TC90 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CCER1Q8TC90 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCER1Q8TC90 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCER1Q8TC90 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCER1Q8TC90 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCER1Q8TC90 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCER1Q8TC90 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC21.5■■□□□ 1.03
CCER1Q8TC90 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCER1Q8TC90 AL354989.2-201ENST00000435838 1540 ntBASIC21.5■■□□□ 1.03
CCER1Q8TC90 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC21.5■■□□□ 1.03
CCER1Q8TC90 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCER1Q8TC90 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCER1Q8TC90 AC114271.1-201ENST00000612689 2813 ntBASIC21.5■■□□□ 1.03
CCER1Q8TC90 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCER1Q8TC90 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCER1Q8TC90 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCER1Q8TC90 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCER1Q8TC90 RPF1-202ENST00000370656 724 ntTSL 2 BASIC21.5■■□□□ 1.03
CCER1Q8TC90 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC21.5■■□□□ 1.03
CCER1Q8TC90 GAS5-209ENST00000430245 723 ntTSL 3 BASIC21.5■■□□□ 1.03
CCER1Q8TC90 CRB3P1-201ENST00000449338 276 ntBASIC21.5■■□□□ 1.03
CCER1Q8TC90 AL035414.1-201ENST00000451327 857 ntBASIC21.5■■□□□ 1.03
CCER1Q8TC90 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CCER1Q8TC90 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCER1Q8TC90 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC21.5■■□□□ 1.03
CCER1Q8TC90 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC21.5■■□□□ 1.03
CCER1Q8TC90 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC21.5■■□□□ 1.03
CCER1Q8TC90 RN7SL713P-201ENST00000582127 302 ntBASIC21.5■■□□□ 1.03
CCER1Q8TC90 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCER1Q8TC90 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCER1Q8TC90 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCER1Q8TC90 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCER1Q8TC90 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC21.5■■□□□ 1.03
CCER1Q8TC90 KRT8P4-201ENST00000509735 1454 ntBASIC21.5■■□□□ 1.03
CCER1Q8TC90 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCER1Q8TC90 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CCER1Q8TC90 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCER1Q8TC90 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC21.5■■□□□ 1.03
CCER1Q8TC90 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCER1Q8TC90 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCER1Q8TC90 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCER1Q8TC90 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC21.49■■□□□ 1.03
CCER1Q8TC90 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCER1Q8TC90 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC21.49■■□□□ 1.03
CCER1Q8TC90 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCER1Q8TC90 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms