Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 AL590824.1-201ENST00000403828 1349 ntBASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 BPIFB5P-201ENST00000457066 1099 ntBASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 PFN2-212ENST00000490975 858 ntTSL 4 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 AC093300.1-201ENST00000510368 1201 ntBASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 AC012158.2-201ENST00000536546 354 ntBASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS4Q8IUM7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 HMGA1P1-201ENST00000415560 1062 ntBASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 AC063952.3-201ENST00000467756 308 ntBASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 ALG1L3P-201ENST00000503331 765 ntBASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 KRT18P37-201ENST00000520711 1282 ntBASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 CES1P2-201ENST00000566467 1242 ntBASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 AC132872.1-201ENST00000566986 1195 ntBASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 CYP4F36P-201ENST00000589193 186 ntBASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 COQ4-204ENST00000608951 781 ntTSL 2 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms