Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
RFPL4BQ6ZWI9 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RFPL4BQ6ZWI9 AC113367.3-201ENST00000508316 1912 ntBASIC13.02□□□□□ -0.32
RFPL4BQ6ZWI9 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 AL590640.2-201ENST00000457038 527 ntBASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 FTH1P14-201ENST00000482930 551 ntBASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 AC025279.2-201ENST00000569730 653 ntBASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.02□□□□□ -0.33
RFPL4BQ6ZWI9 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 AC018529.2-202ENST00000611482 3087 ntBASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 KRT43P-201ENST00000434019 910 ntBASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 C2orf27AP3-201ENST00000434123 579 ntBASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 AC245100.3-201ENST00000441281 285 ntBASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 CROCCP4-201ENST00000457096 498 ntBASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 ECM1P1-201ENST00000604092 1279 ntBASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 AC244669.2-201ENST00000612320 853 ntBASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 AL354718.3-201ENST00000616414 581 ntBASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 ENPP7P14-201ENST00000621765 1040 ntBASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 CR382287.1-201ENST00000623954 586 ntBASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 AC015818.8-201ENST00000587907 1519 ntBASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFPL4BQ6ZWI9 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms