Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 KRT18P9-201ENST00000604826 1300 ntBASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 LAP3P2-201ENST00000454686 1454 ntBASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 AC092580.1-201ENST00000433998 658 ntBASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 DUTP3-201ENST00000450025 415 ntBASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 DUX4L50-201ENST00000455245 715 ntBASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 AC114947.1-202ENST00000514136 344 ntBASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 IGLV3-15-201ENST00000518356 244 ntBASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 AC093752.3-201ENST00000567343 901 ntBASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 AC104506.1-201ENST00000609247 429 ntBASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3F3CQ6NXT2 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms