Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 RN7SL258P-201ENST00000478664 300 ntBASIC18.66■□□□□ 0.58
CALD1Q05682 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.66■□□□□ 0.58
CALD1Q05682 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.66■□□□□ 0.58
CALD1Q05682 MAX-218ENST00000557746 571 ntTSL 4 BASIC18.66■□□□□ 0.58
CALD1Q05682 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.66■□□□□ 0.58
CALD1Q05682 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.66■□□□□ 0.58
CALD1Q05682 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.66■□□□□ 0.58
CALD1Q05682 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.66■□□□□ 0.58
CALD1Q05682 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALD1Q05682 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALD1Q05682 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC18.66■□□□□ 0.58
CALD1Q05682 AC027601.5-201ENST00000624065 2482 ntBASIC18.66■□□□□ 0.58
CALD1Q05682 AL590824.1-201ENST00000403828 1349 ntBASIC18.66■□□□□ 0.58
CALD1Q05682 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC18.66■□□□□ 0.58
CALD1Q05682 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CALD1Q05682 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALD1Q05682 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALD1Q05682 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALD1Q05682 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CALD1Q05682 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALD1Q05682 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALD1Q05682 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
CALD1Q05682 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CALD1Q05682 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALD1Q05682 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CALD1Q05682 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALD1Q05682 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CALD1Q05682 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CALD1Q05682 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CALD1Q05682 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.65■□□□□ 0.58
CALD1Q05682 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CALD1Q05682 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.65■□□□□ 0.58
CALD1Q05682 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.65■□□□□ 0.58
CALD1Q05682 HMGA1P1-201ENST00000415560 1062 ntBASIC18.65■□□□□ 0.58
CALD1Q05682 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.65■□□□□ 0.58
CALD1Q05682 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC18.65■□□□□ 0.58
CALD1Q05682 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.65■□□□□ 0.58
CALD1Q05682 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CALD1Q05682 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.65■□□□□ 0.58
CALD1Q05682 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CALD1Q05682 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CALD1Q05682 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.65■□□□□ 0.58
CALD1Q05682 LINC01783-202ENST00000614408 828 ntBASIC18.65■□□□□ 0.58
CALD1Q05682 BX284668.2-205ENST00000619677 828 ntBASIC18.65■□□□□ 0.58
CALD1Q05682 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC18.65■□□□□ 0.58
CALD1Q05682 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC18.65■□□□□ 0.58
CALD1Q05682 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC18.65■□□□□ 0.58
CALD1Q05682 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.65■□□□□ 0.58
CALD1Q05682 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CALD1Q05682 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CALD1Q05682 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALD1Q05682 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
CALD1Q05682 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC18.64■□□□□ 0.58
CALD1Q05682 AC079781.5-202ENST00000641784 3743 ntBASIC18.64■□□□□ 0.58
CALD1Q05682 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC18.64■□□□□ 0.58
CALD1Q05682 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALD1Q05682 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALD1Q05682 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.64■□□□□ 0.57
CALD1Q05682 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CALD1Q05682 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALD1Q05682 CR383656.2-201ENST00000548656 2254 ntBASIC18.64■□□□□ 0.57
CALD1Q05682 AC015909.3-201ENST00000572855 1794 ntBASIC18.64■□□□□ 0.57
CALD1Q05682 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CALD1Q05682 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CALD1Q05682 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CALD1Q05682 BCYRN1-201ENST00000418539 200 ntBASIC18.64■□□□□ 0.57
CALD1Q05682 RPS9P1-201ENST00000419943 583 ntBASIC18.64■□□□□ 0.57
CALD1Q05682 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.64■□□□□ 0.57
CALD1Q05682 AC073150.1-201ENST00000450406 1084 ntBASIC18.64■□□□□ 0.57
CALD1Q05682 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.64■□□□□ 0.57
CALD1Q05682 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CALD1Q05682 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.64■□□□□ 0.57
CALD1Q05682 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC18.64■□□□□ 0.57
CALD1Q05682 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.64■□□□□ 0.57
CALD1Q05682 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CALD1Q05682 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC18.64■□□□□ 0.57
CALD1Q05682 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.64■□□□□ 0.57
CALD1Q05682 MEG3_2.1-201ENST00000611456 105 ntBASIC18.64■□□□□ 0.57
CALD1Q05682 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.64■□□□□ 0.57
CALD1Q05682 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms