Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 GOLGA2P4-201ENST00000441462 777 ntBASIC12.57□□□□□ -0.4
HIST1H3AP68431 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 RPL18P13-201ENST00000478088 569 ntBASIC12.57□□□□□ -0.4
HIST1H3AP68431 FAM86HP-204ENST00000513466 959 ntBASIC12.57□□□□□ -0.4
HIST1H3AP68431 SCARNA21-201ENST00000517026 139 ntBASIC12.57□□□□□ -0.4
HIST1H3AP68431 IGHV3-71-201ENST00000523324 359 ntBASIC12.57□□□□□ -0.4
HIST1H3AP68431 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 AC140658.4-201ENST00000561990 352 ntBASIC12.57□□□□□ -0.4
HIST1H3AP68431 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 BNIP3P13-201ENST00000599968 566 ntBASIC12.57□□□□□ -0.4
HIST1H3AP68431 AL096828.3-201ENST00000615354 462 ntBASIC12.57□□□□□ -0.4
HIST1H3AP68431 AC022748.3-201ENST00000621828 275 ntBASIC12.57□□□□□ -0.4
HIST1H3AP68431 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.57□□□□□ -0.4
HIST1H3AP68431 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 AC010327.5-201ENST00000586923 3061 ntBASIC12.57□□□□□ -0.4
HIST1H3AP68431 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 SHMT1P1-201ENST00000419974 1312 ntBASIC12.57□□□□□ -0.4
HIST1H3AP68431 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.57□□□□□ -0.4
HIST1H3AP68431 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H3AP68431 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 AC103592.1-201ENST00000394513 664 ntBASIC12.56□□□□□ -0.4
HIST1H3AP68431 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 BTBD6P1-201ENST00000412176 1267 ntBASIC12.56□□□□□ -0.4
HIST1H3AP68431 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 BNIP3P42-201ENST00000454982 569 ntBASIC12.56□□□□□ -0.4
HIST1H3AP68431 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms