Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
VSX2P58304 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.81□□□□□ -0.2
VSX2P58304 SLC25A24P2-201ENST00000415059 510 ntBASIC13.81□□□□□ -0.2
VSX2P58304 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.81□□□□□ -0.2
VSX2P58304 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.81□□□□□ -0.2
VSX2P58304 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
VSX2P58304 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.81□□□□□ -0.2
VSX2P58304 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.81□□□□□ -0.2
VSX2P58304 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
VSX2P58304 AP001505.2-201ENST00000616815 443 ntBASIC13.81□□□□□ -0.2
VSX2P58304 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.81□□□□□ -0.2
VSX2P58304 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
VSX2P58304 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
VSX2P58304 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
VSX2P58304 AC008132.1-202ENST00000342005 1389 ntBASIC13.81□□□□□ -0.2
VSX2P58304 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.81□□□□□ -0.2
VSX2P58304 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
VSX2P58304 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.8□□□□□ -0.2
VSX2P58304 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.8□□□□□ -0.2
VSX2P58304 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.8□□□□□ -0.2
VSX2P58304 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
VSX2P58304 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.8□□□□□ -0.2
VSX2P58304 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.8□□□□□ -0.2
VSX2P58304 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.8□□□□□ -0.2
VSX2P58304 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
VSX2P58304 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.8□□□□□ -0.2
VSX2P58304 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.8□□□□□ -0.2
VSX2P58304 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
VSX2P58304 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.8□□□□□ -0.2
VSX2P58304 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.8□□□□□ -0.2
VSX2P58304 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VSX2P58304 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
VSX2P58304 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.8□□□□□ -0.2
VSX2P58304 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.8□□□□□ -0.2
VSX2P58304 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.8□□□□□ -0.2
VSX2P58304 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VSX2P58304 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.8□□□□□ -0.2
VSX2P58304 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.8□□□□□ -0.2
VSX2P58304 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
VSX2P58304 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.8□□□□□ -0.2
VSX2P58304 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.8□□□□□ -0.2
VSX2P58304 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.8□□□□□ -0.2
VSX2P58304 AL591471.1-201ENST00000621855 229 ntBASIC13.8□□□□□ -0.2
VSX2P58304 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.8□□□□□ -0.2
VSX2P58304 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.8□□□□□ -0.2
VSX2P58304 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VSX2P58304 AC064801.2-201ENST00000625052 1303 ntBASIC13.8□□□□□ -0.2
VSX2P58304 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.8□□□□□ -0.2
VSX2P58304 AC090505.1-201ENST00000430515 1834 ntBASIC13.8□□□□□ -0.2
VSX2P58304 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VSX2P58304 AC012617.1-204ENST00000586340 2305 ntBASIC13.8□□□□□ -0.2
VSX2P58304 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.8□□□□□ -0.2
VSX2P58304 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.8□□□□□ -0.2
VSX2P58304 BX640514.1-201ENST00000583223 1918 ntBASIC13.8□□□□□ -0.2
VSX2P58304 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VSX2P58304 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
VSX2P58304 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.8□□□□□ -0.2
VSX2P58304 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VSX2P58304 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VSX2P58304 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
VSX2P58304 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VSX2P58304 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.79□□□□□ -0.2
VSX2P58304 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
VSX2P58304 AC005252.3-201ENST00000623855 2258 ntBASIC13.79□□□□□ -0.2
VSX2P58304 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VSX2P58304 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
VSX2P58304 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VSX2P58304 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms