Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN6P56747 ACTBP7-201ENST00000418351 1124 ntBASIC13.76□□□□□ -0.21
CLDN6P56747 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN6P56747 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.76□□□□□ -0.21
CLDN6P56747 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN6P56747 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN6P56747 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN6P56747 AC093826.1-201ENST00000508655 993 ntBASIC13.76□□□□□ -0.21
CLDN6P56747 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN6P56747 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
CLDN6P56747 NAMA-206ENST00000605377 509 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN6P56747 AC010976.2-201ENST00000609697 852 ntBASIC13.76□□□□□ -0.21
CLDN6P56747 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN6P56747 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CLDN6P56747 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLDN6P56747 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 AC067931.2-201ENST00000623655 2003 ntBASIC13.76□□□□□ -0.21
CLDN6P56747 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLDN6P56747 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN6P56747 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN6P56747 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CLDN6P56747 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN6P56747 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN6P56747 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CLDN6P56747 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN6P56747 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN6P56747 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
CLDN6P56747 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN6P56747 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.75□□□□□ -0.21
CLDN6P56747 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN6P56747 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CLDN6P56747 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN6P56747 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN6P56747 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN6P56747 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN6P56747 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC13.75□□□□□ -0.21
CLDN6P56747 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDN6P56747 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLDN6P56747 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN6P56747 RPL35P9-201ENST00000446059 350 ntBASIC13.75□□□□□ -0.21
CLDN6P56747 RN7SL494P-201ENST00000461517 304 ntBASIC13.75□□□□□ -0.21
CLDN6P56747 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC13.75□□□□□ -0.21
CLDN6P56747 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN6P56747 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDN6P56747 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC13.75□□□□□ -0.21
CLDN6P56747 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
CLDN6P56747 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN6P56747 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN6P56747 AC027139.1-201ENST00000565286 951 ntBASIC13.75□□□□□ -0.21
CLDN6P56747 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDN6P56747 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDN6P56747 AC010632.2-201ENST00000588369 1224 ntBASIC13.75□□□□□ -0.21
CLDN6P56747 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDN6P56747 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN6P56747 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN6P56747 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDN6P56747 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN6P56747 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN6P56747 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLDN6P56747 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLDN6P56747 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms