Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CMC4P56277 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CMC4P56277 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CMC4P56277 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC10.72□□□□□ -0.69
CMC4P56277 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC10.72□□□□□ -0.69
CMC4P56277 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC10.72□□□□□ -0.69
CMC4P56277 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CMC4P56277 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CMC4P56277 TPO-203ENST00000346956 2923 ntTSL 5 BASIC10.71□□□□□ -0.69
CMC4P56277 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CMC4P56277 AP002414.2-201ENST00000591780 3365 ntBASIC10.71□□□□□ -0.69
CMC4P56277 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
CMC4P56277 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CMC4P56277 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
CMC4P56277 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC10.71□□□□□ -0.69
CMC4P56277 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
CMC4P56277 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CMC4P56277 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CMC4P56277 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CMC4P56277 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC10.71□□□□□ -0.69
CMC4P56277 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC10.71□□□□□ -0.69
CMC4P56277 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
CMC4P56277 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
CMC4P56277 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
CMC4P56277 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CMC4P56277 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CMC4P56277 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC10.71□□□□□ -0.69
CMC4P56277 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CMC4P56277 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CMC4P56277 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CMC4P56277 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CMC4P56277 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
CMC4P56277 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
CMC4P56277 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CMC4P56277 FRMPD2B-201ENST00000431305 1347 ntBASIC10.71□□□□□ -0.69
CMC4P56277 OR2R1P-201ENST00000441404 914 ntBASIC10.71□□□□□ -0.69
CMC4P56277 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC10.71□□□□□ -0.69
CMC4P56277 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC10.71□□□□□ -0.69
CMC4P56277 PFN2-206ENST00000461930 606 ntTSL 4 BASIC10.71□□□□□ -0.69
CMC4P56277 CCT8L1P-201ENST00000465400 1674 ntBASIC10.71□□□□□ -0.69
CMC4P56277 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC10.71□□□□□ -0.69
CMC4P56277 GOLGA2P8-201ENST00000505201 779 ntBASIC10.71□□□□□ -0.69
CMC4P56277 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC10.71□□□□□ -0.69
CMC4P56277 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
CMC4P56277 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC10.71□□□□□ -0.69
CMC4P56277 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC10.71□□□□□ -0.69
CMC4P56277 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC10.71□□□□□ -0.69
CMC4P56277 AL161670.2-201ENST00000557650 1227 ntBASIC10.71□□□□□ -0.69
CMC4P56277 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC10.71□□□□□ -0.69
CMC4P56277 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
CMC4P56277 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC10.71□□□□□ -0.69
CMC4P56277 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CMC4P56277 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC10.71□□□□□ -0.69
CMC4P56277 MIR3615-201ENST00000581999 87 ntBASIC10.71□□□□□ -0.69
CMC4P56277 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CMC4P56277 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC10.71□□□□□ -0.69
CMC4P56277 MIR6787-201ENST00000616675 61 ntBASIC10.71□□□□□ -0.69
CMC4P56277 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC10.71□□□□□ -0.69
CMC4P56277 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC10.71□□□□□ -0.7
CMC4P56277 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CMC4P56277 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC10.71□□□□□ -0.7
CMC4P56277 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CMC4P56277 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
CMC4P56277 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CMC4P56277 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
CMC4P56277 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
CMC4P56277 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CMC4P56277 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CMC4P56277 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
CMC4P56277 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.71□□□□□ -0.7
CMC4P56277 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC10.71□□□□□ -0.7
CMC4P56277 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CMC4P56277 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
CMC4P56277 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC10.7□□□□□ -0.7
CMC4P56277 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CMC4P56277 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
CMC4P56277 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
CMC4P56277 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
CMC4P56277 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC10.7□□□□□ -0.7
CMC4P56277 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC10.7□□□□□ -0.7
CMC4P56277 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC10.7□□□□□ -0.7
CMC4P56277 RDX-218ENST00000544551 4117 ntTSL 2 BASIC10.7□□□□□ -0.7
CMC4P56277 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
CMC4P56277 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
CMC4P56277 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms