Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.83□□□□□ -0.36
GFRA1P56159 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFRA1P56159 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFRA1P56159 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFRA1P56159 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.83□□□□□ -0.36
GFRA1P56159 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GFRA1P56159 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.83□□□□□ -0.36
GFRA1P56159 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.83□□□□□ -0.36
GFRA1P56159 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GFRA1P56159 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GFRA1P56159 AC152010.1-201ENST00000415779 2006 ntBASIC12.83□□□□□ -0.36
GFRA1P56159 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFRA1P56159 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
GFRA1P56159 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
GFRA1P56159 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
GFRA1P56159 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
GFRA1P56159 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.82□□□□□ -0.36
GFRA1P56159 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
GFRA1P56159 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.82□□□□□ -0.36
GFRA1P56159 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.82□□□□□ -0.36
GFRA1P56159 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.82□□□□□ -0.36
GFRA1P56159 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
GFRA1P56159 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.82□□□□□ -0.36
GFRA1P56159 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.82□□□□□ -0.36
GFRA1P56159 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
GFRA1P56159 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
GFRA1P56159 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.82□□□□□ -0.36
GFRA1P56159 MIR645-201ENST00000385283 94 ntBASIC12.82□□□□□ -0.36
GFRA1P56159 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.82□□□□□ -0.36
GFRA1P56159 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC12.82□□□□□ -0.36
GFRA1P56159 SERPINA7P1-201ENST00000443077 631 ntBASIC12.82□□□□□ -0.36
GFRA1P56159 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.82□□□□□ -0.36
GFRA1P56159 FTH1P22-201ENST00000456305 520 ntBASIC12.82□□□□□ -0.36
GFRA1P56159 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.82□□□□□ -0.36
GFRA1P56159 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.82□□□□□ -0.36
GFRA1P56159 NDUFS6P1-201ENST00000485187 316 ntBASIC12.82□□□□□ -0.36
GFRA1P56159 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.82□□□□□ -0.36
GFRA1P56159 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC12.82□□□□□ -0.36
GFRA1P56159 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.82□□□□□ -0.36
GFRA1P56159 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.82□□□□□ -0.36
GFRA1P56159 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.82□□□□□ -0.36
GFRA1P56159 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.82□□□□□ -0.36
GFRA1P56159 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.82□□□□□ -0.36
GFRA1P56159 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
GFRA1P56159 AL353726.2-201ENST00000623259 884 ntBASIC12.82□□□□□ -0.36
GFRA1P56159 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
GFRA1P56159 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
GFRA1P56159 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.82□□□□□ -0.36
GFRA1P56159 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
GFRA1P56159 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
GFRA1P56159 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
GFRA1P56159 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
GFRA1P56159 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.81□□□□□ -0.36
GFRA1P56159 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 AC067931.2-201ENST00000623655 2003 ntBASIC12.81□□□□□ -0.36
GFRA1P56159 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.81□□□□□ -0.36
GFRA1P56159 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
GFRA1P56159 AC139749.1-202ENST00000617529 3139 ntBASIC12.81□□□□□ -0.36
GFRA1P56159 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.81□□□□□ -0.36
GFRA1P56159 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
GFRA1P56159 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.81□□□□□ -0.36
GFRA1P56159 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.81□□□□□ -0.36
GFRA1P56159 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
GFRA1P56159 AC120057.1-201ENST00000483947 663 ntBASIC12.81□□□□□ -0.36
GFRA1P56159 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms