Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 RN7SL530P-201ENST00000485097 298 ntBASIC15.3■□□□□ 0.04
CDH8P55286 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH8P55286 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH8P55286 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH8P55286 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH8P55286 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH8P55286 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH8P55286 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH8P55286 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH8P55286 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.3■□□□□ 0.04
CDH8P55286 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.3■□□□□ 0.04
CDH8P55286 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH8P55286 AC093752.3-201ENST00000567343 901 ntBASIC15.3■□□□□ 0.04
CDH8P55286 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH8P55286 MIR3619-201ENST00000579667 83 ntBASIC15.3■□□□□ 0.04
CDH8P55286 RN7SL574P-201ENST00000581512 297 ntBASIC15.3■□□□□ 0.04
CDH8P55286 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.3■□□□□ 0.04
CDH8P55286 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.3■□□□□ 0.04
CDH8P55286 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.3■□□□□ 0.04
CDH8P55286 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH8P55286 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH8P55286 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH8P55286 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH8P55286 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH8P55286 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH8P55286 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH8P55286 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH8P55286 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH8P55286 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH8P55286 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CDH8P55286 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH8P55286 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH8P55286 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH8P55286 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH8P55286 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH8P55286 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH8P55286 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH8P55286 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CDH8P55286 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDH8P55286 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 TCAM1P-207ENST00000485295 1537 ntBASIC15.29■□□□□ 0.04
CDH8P55286 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.29■□□□□ 0.04
CDH8P55286 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH8P55286 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH8P55286 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDH8P55286 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 LINC01815-202ENST00000641468 1409 ntBASIC15.29■□□□□ 0.04
CDH8P55286 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH8P55286 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH8P55286 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.29■□□□□ 0.04
CDH8P55286 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 USP17L6P-201ENST00000382470 1197 ntBASIC15.29■□□□□ 0.04
CDH8P55286 PDIA3P2-201ENST00000428073 158 ntBASIC15.29■□□□□ 0.04
CDH8P55286 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 DUX4L50-201ENST00000455245 715 ntBASIC15.29■□□□□ 0.04
CDH8P55286 NUP210P1-202ENST00000504322 710 ntBASIC15.29■□□□□ 0.04
CDH8P55286 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.29■□□□□ 0.04
CDH8P55286 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH8P55286 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH8P55286 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDH8P55286 AL512310.5-201ENST00000551999 515 ntBASIC15.29■□□□□ 0.04
CDH8P55286 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.29■□□□□ 0.04
CDH8P55286 AL161670.2-201ENST00000557650 1227 ntBASIC15.29■□□□□ 0.04
CDH8P55286 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 AC097724.1-201ENST00000609581 426 ntBASIC15.29■□□□□ 0.04
CDH8P55286 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH8P55286 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH8P55286 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDH8P55286 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH8P55286 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH8P55286 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH8P55286 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CDH8P55286 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH8P55286 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms