Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKN2DP55273 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CDKN2DP55273 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.18□□□□□ -0.14
CDKN2DP55273 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKN2DP55273 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
CDKN2DP55273 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKN2DP55273 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CDKN2DP55273 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CDKN2DP55273 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDKN2DP55273 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 VDAC1P1-201ENST00000439229 848 ntBASIC14.18□□□□□ -0.14
CDKN2DP55273 MTX1P1-201ENST00000440904 838 ntBASIC14.18□□□□□ -0.14
CDKN2DP55273 KRT223P-202ENST00000449164 1292 ntBASIC14.18□□□□□ -0.14
CDKN2DP55273 RNMTL1P1-201ENST00000454103 560 ntBASIC14.18□□□□□ -0.14
CDKN2DP55273 RPL18P13-201ENST00000478088 569 ntBASIC14.18□□□□□ -0.14
CDKN2DP55273 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.18□□□□□ -0.14
CDKN2DP55273 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.18□□□□□ -0.14
CDKN2DP55273 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKN2DP55273 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKN2DP55273 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKN2DP55273 AL512310.5-201ENST00000551999 515 ntBASIC14.18□□□□□ -0.14
CDKN2DP55273 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKN2DP55273 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.18□□□□□ -0.14
CDKN2DP55273 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 AC010328.2-201ENST00000597698 1111 ntBASIC14.18□□□□□ -0.14
CDKN2DP55273 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.18□□□□□ -0.14
CDKN2DP55273 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.18□□□□□ -0.14
CDKN2DP55273 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDKN2DP55273 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CDKN2DP55273 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKN2DP55273 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CDKN2DP55273 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
CDKN2DP55273 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKN2DP55273 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CDKN2DP55273 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CDKN2DP55273 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
CDKN2DP55273 AC007952.5-201ENST00000572818 1486 ntBASIC14.18□□□□□ -0.14
CDKN2DP55273 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKN2DP55273 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKN2DP55273 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.18□□□□□ -0.14
CDKN2DP55273 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CDKN2DP55273 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDKN2DP55273 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.17□□□□□ -0.14
CDKN2DP55273 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.17□□□□□ -0.14
CDKN2DP55273 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.17□□□□□ -0.14
CDKN2DP55273 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.17□□□□□ -0.14
CDKN2DP55273 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CDKN2DP55273 AC005014.1-201ENST00000432006 2976 ntBASIC14.17□□□□□ -0.14
CDKN2DP55273 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDKN2DP55273 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CDKN2DP55273 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.17□□□□□ -0.14
CDKN2DP55273 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CDKN2DP55273 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.17□□□□□ -0.14
CDKN2DP55273 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDKN2DP55273 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.17□□□□□ -0.14
CDKN2DP55273 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 MIR658-201ENST00000385210 100 ntBASIC14.17□□□□□ -0.14
CDKN2DP55273 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.17□□□□□ -0.14
CDKN2DP55273 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.17□□□□□ -0.14
CDKN2DP55273 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CDKN2DP55273 KRT18P15-201ENST00000458108 1291 ntBASIC14.17□□□□□ -0.14
CDKN2DP55273 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDKN2DP55273 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.17□□□□□ -0.14
CDKN2DP55273 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.17□□□□□ -0.14
CDKN2DP55273 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms