Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 RHOQP1-201ENST00000555758 579 ntBASIC15.26■□□□□ 0.03
CACNA2D1P54289 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 AC020922.3-201ENST00000595064 547 ntBASIC15.26■□□□□ 0.03
CACNA2D1P54289 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 AC090505.1-201ENST00000430515 1834 ntBASIC15.26■□□□□ 0.03
CACNA2D1P54289 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 AC064801.2-201ENST00000625052 1303 ntBASIC15.25■□□□□ 0.03
CACNA2D1P54289 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 RNA5SP359-201ENST00000364838 113 ntBASIC15.25■□□□□ 0.03
CACNA2D1P54289 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 TSPY25P-201ENST00000429463 745 ntBASIC15.25■□□□□ 0.03
CACNA2D1P54289 AC092580.1-201ENST00000433998 658 ntBASIC15.25■□□□□ 0.03
CACNA2D1P54289 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 AL133499.1-201ENST00000596207 608 ntBASIC15.25■□□□□ 0.03
CACNA2D1P54289 MIR6074-201ENST00000612054 107 ntBASIC15.25■□□□□ 0.03
CACNA2D1P54289 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 BX640514.1-201ENST00000583223 1918 ntBASIC15.25■□□□□ 0.03
CACNA2D1P54289 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CACNA2D1P54289 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.25■□□□□ 0.03
CACNA2D1P54289 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CACNA2D1P54289 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CACNA2D1P54289 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CACNA2D1P54289 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CACNA2D1P54289 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.24■□□□□ 0.03
CACNA2D1P54289 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CACNA2D1P54289 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CACNA2D1P54289 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
CACNA2D1P54289 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CACNA2D1P54289 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CACNA2D1P54289 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CACNA2D1P54289 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CACNA2D1P54289 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CACNA2D1P54289 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CACNA2D1P54289 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.24■□□□□ 0.03
CACNA2D1P54289 AC091046.1-201ENST00000331871 207 ntBASIC15.24■□□□□ 0.03
CACNA2D1P54289 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CACNA2D1P54289 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CACNA2D1P54289 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
CACNA2D1P54289 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.24■□□□□ 0.03
CACNA2D1P54289 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.24■□□□□ 0.03
CACNA2D1P54289 AL133466.1-201ENST00000447582 150 ntBASIC15.24■□□□□ 0.03
CACNA2D1P54289 RN7SL720P-201ENST00000488178 304 ntBASIC15.24■□□□□ 0.03
CACNA2D1P54289 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.24■□□□□ 0.03
CACNA2D1P54289 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.24■□□□□ 0.03
CACNA2D1P54289 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms