Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 KRT8P24-201ENST00000560290 1559 ntBASIC13.17□□□□□ -0.3
CENPAP49450 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
CENPAP49450 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.17□□□□□ -0.3
CENPAP49450 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.17□□□□□ -0.3
CENPAP49450 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CENPAP49450 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.17□□□□□ -0.3
CENPAP49450 AP006294.1-201ENST00000415407 339 ntBASIC13.17□□□□□ -0.3
CENPAP49450 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.17□□□□□ -0.3
CENPAP49450 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 MESTP3-201ENST00000503460 968 ntBASIC13.17□□□□□ -0.3
CENPAP49450 TP53TG3HP-202ENST00000569755 579 ntBASIC13.17□□□□□ -0.3
CENPAP49450 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.17□□□□□ -0.3
CENPAP49450 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.17□□□□□ -0.3
CENPAP49450 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CENPAP49450 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CENPAP49450 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.17□□□□□ -0.3
CENPAP49450 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.17□□□□□ -0.3
CENPAP49450 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.17□□□□□ -0.3
CENPAP49450 AC131902.2-201ENST00000566892 2172 ntBASIC13.17□□□□□ -0.3
CENPAP49450 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.17□□□□□ -0.3
CENPAP49450 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CENPAP49450 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CENPAP49450 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 CLUHP2-201ENST00000426660 1303 ntBASIC13.16□□□□□ -0.3
CENPAP49450 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CENPAP49450 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.16□□□□□ -0.3
CENPAP49450 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CENPAP49450 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CENPAP49450 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.16□□□□□ -0.3
CENPAP49450 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CENPAP49450 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.16□□□□□ -0.3
CENPAP49450 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.16□□□□□ -0.3
CENPAP49450 AL355864.2-201ENST00000447420 863 ntBASIC13.16□□□□□ -0.3
CENPAP49450 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CENPAP49450 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
CENPAP49450 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.16□□□□□ -0.3
CENPAP49450 AC103988.2-201ENST00000561804 725 ntBASIC13.16□□□□□ -0.3
CENPAP49450 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.16□□□□□ -0.3
CENPAP49450 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.16□□□□□ -0.3
CENPAP49450 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.16□□□□□ -0.3
CENPAP49450 AC138696.2-201ENST00000607376 223 ntBASIC13.16□□□□□ -0.3
CENPAP49450 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.16□□□□□ -0.3
CENPAP49450 ENPP7P14-201ENST00000621765 1040 ntBASIC13.16□□□□□ -0.3
CENPAP49450 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.16□□□□□ -0.3
CENPAP49450 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CENPAP49450 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
CENPAP49450 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.16□□□□□ -0.3
CENPAP49450 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.16□□□□□ -0.3
CENPAP49450 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.16□□□□□ -0.3
CENPAP49450 AC015909.5-201ENST00000624336 2266 ntBASIC13.16□□□□□ -0.3
CENPAP49450 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CENPAP49450 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.16□□□□□ -0.3
CENPAP49450 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.16□□□□□ -0.3
CENPAP49450 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CENPAP49450 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.16□□□□□ -0.3
CENPAP49450 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.16□□□□□ -0.3
CENPAP49450 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.16□□□□□ -0.3
CENPAP49450 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
CENPAP49450 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.16□□□□□ -0.3
CENPAP49450 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms