Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.85□□□□□ -0.35
CDKN2AP42771 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDKN2AP42771 CICP8-201ENST00000455800 2813 ntBASIC12.85□□□□□ -0.35
CDKN2AP42771 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDKN2AP42771 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDKN2AP42771 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.85□□□□□ -0.35
CDKN2AP42771 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.85□□□□□ -0.35
CDKN2AP42771 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDKN2AP42771 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CDKN2AP42771 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CDKN2AP42771 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDKN2AP42771 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.85□□□□□ -0.35
CDKN2AP42771 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.85□□□□□ -0.35
CDKN2AP42771 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDKN2AP42771 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDKN2AP42771 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDKN2AP42771 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDKN2AP42771 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CDKN2AP42771 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CDKN2AP42771 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.84□□□□□ -0.35
CDKN2AP42771 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.84□□□□□ -0.35
CDKN2AP42771 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.84□□□□□ -0.35
CDKN2AP42771 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.84□□□□□ -0.35
CDKN2AP42771 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.84□□□□□ -0.35
CDKN2AP42771 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CDKN2AP42771 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.84□□□□□ -0.35
CDKN2AP42771 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.84□□□□□ -0.35
CDKN2AP42771 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
CDKN2AP42771 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.84□□□□□ -0.35
CDKN2AP42771 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.84□□□□□ -0.35
CDKN2AP42771 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.84□□□□□ -0.35
CDKN2AP42771 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.84□□□□□ -0.35
CDKN2AP42771 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.84□□□□□ -0.35
CDKN2AP42771 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.84□□□□□ -0.35
CDKN2AP42771 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.84□□□□□ -0.35
CDKN2AP42771 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.84□□□□□ -0.35
CDKN2AP42771 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.84□□□□□ -0.35
CDKN2AP42771 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.84□□□□□ -0.35
CDKN2AP42771 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.84□□□□□ -0.35
CDKN2AP42771 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.84□□□□□ -0.35
CDKN2AP42771 Z98259.2-201ENST00000641583 609 ntBASIC12.84□□□□□ -0.35
CDKN2AP42771 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.84□□□□□ -0.35
CDKN2AP42771 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.84□□□□□ -0.35
CDKN2AP42771 AL023775.1-201ENST00000454907 1746 ntBASIC12.84□□□□□ -0.35
CDKN2AP42771 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.84□□□□□ -0.35
CDKN2AP42771 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.84□□□□□ -0.35
CDKN2AP42771 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.84□□□□□ -0.35
CDKN2AP42771 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CDKN2AP42771 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CDKN2AP42771 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.84□□□□□ -0.35
CDKN2AP42771 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
CDKN2AP42771 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDKN2AP42771 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CDKN2AP42771 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.83□□□□□ -0.35
CDKN2AP42771 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
CDKN2AP42771 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CDKN2AP42771 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.83□□□□□ -0.35
CDKN2AP42771 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.83□□□□□ -0.35
CDKN2AP42771 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CDKN2AP42771 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CDKN2AP42771 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.35
CDKN2AP42771 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CDKN2AP42771 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CDKN2AP42771 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.83□□□□□ -0.35
CDKN2AP42771 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDKN2AP42771 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CDKN2AP42771 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDKN2AP42771 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDKN2AP42771 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDKN2AP42771 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.83□□□□□ -0.36
CDKN2AP42771 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDKN2AP42771 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDKN2AP42771 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CDKN2AP42771 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDKN2AP42771 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDKN2AP42771 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDKN2AP42771 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms