Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.69□□□□□ -0.06
FDFT1P37268 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
FDFT1P37268 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.69□□□□□ -0.06
FDFT1P37268 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
FDFT1P37268 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.69□□□□□ -0.06
FDFT1P37268 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
FDFT1P37268 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.69□□□□□ -0.06
FDFT1P37268 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 AC012441.2-201ENST00000444843 739 ntBASIC14.69□□□□□ -0.06
FDFT1P37268 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.69□□□□□ -0.06
FDFT1P37268 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
FDFT1P37268 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.69□□□□□ -0.06
FDFT1P37268 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.69□□□□□ -0.06
FDFT1P37268 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 AC005225.4-201ENST00000557330 545 ntBASIC14.69□□□□□ -0.06
FDFT1P37268 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.69□□□□□ -0.06
FDFT1P37268 AC244157.2-201ENST00000616239 1006 ntBASIC14.69□□□□□ -0.06
FDFT1P37268 Z98259.2-201ENST00000641583 609 ntBASIC14.69□□□□□ -0.06
FDFT1P37268 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
FDFT1P37268 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.69□□□□□ -0.06
FDFT1P37268 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
FDFT1P37268 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
FDFT1P37268 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
FDFT1P37268 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
FDFT1P37268 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 AC072061.1-201ENST00000569710 2234 ntBASIC14.69□□□□□ -0.06
FDFT1P37268 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
FDFT1P37268 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
FDFT1P37268 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
FDFT1P37268 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.69□□□□□ -0.06
FDFT1P37268 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.68□□□□□ -0.06
FDFT1P37268 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.68□□□□□ -0.06
FDFT1P37268 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.68□□□□□ -0.06
FDFT1P37268 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
FDFT1P37268 AC105206.1-202ENST00000314927 2368 ntBASIC14.68□□□□□ -0.06
FDFT1P37268 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 FAM90A12P-201ENST00000519497 2375 ntBASIC14.68□□□□□ -0.06
FDFT1P37268 FAM90A24P-201ENST00000520792 2369 ntBASIC14.68□□□□□ -0.06
FDFT1P37268 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.68□□□□□ -0.06
FDFT1P37268 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.68□□□□□ -0.06
FDFT1P37268 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
FDFT1P37268 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.68□□□□□ -0.06
FDFT1P37268 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.68□□□□□ -0.06
FDFT1P37268 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.68□□□□□ -0.06
FDFT1P37268 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.68□□□□□ -0.06
FDFT1P37268 AK2P2-201ENST00000439142 405 ntBASIC14.68□□□□□ -0.06
FDFT1P37268 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.68□□□□□ -0.06
FDFT1P37268 CTBP2P5-201ENST00000454986 1264 ntBASIC14.68□□□□□ -0.06
FDFT1P37268 KRT18P15-201ENST00000458108 1291 ntBASIC14.68□□□□□ -0.06
FDFT1P37268 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.68□□□□□ -0.06
FDFT1P37268 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.68□□□□□ -0.06
FDFT1P37268 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.68□□□□□ -0.06
FDFT1P37268 AC100827.2-201ENST00000563214 1194 ntBASIC14.68□□□□□ -0.06
FDFT1P37268 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.68□□□□□ -0.06
FDFT1P37268 AC124068.2-201ENST00000569473 1109 ntBASIC14.68□□□□□ -0.06
FDFT1P37268 MIR4783-201ENST00000580343 82 ntBASIC14.68□□□□□ -0.06
FDFT1P37268 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.68□□□□□ -0.06
FDFT1P37268 AC090386.2-201ENST00000623010 1039 ntBASIC14.68□□□□□ -0.06
FDFT1P37268 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
FDFT1P37268 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
FDFT1P37268 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.68□□□□□ -0.06
FDFT1P37268 DMBT1P1-203ENST00000636837 4628 ntBASIC14.68□□□□□ -0.06
FDFT1P37268 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms