Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 MIR1227-201ENST00000408484 88 ntBASIC14.43□□□□□ -0.1
HOXD12P35452 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXD12P35452 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.43□□□□□ -0.1
HOXD12P35452 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HOXD12P35452 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXD12P35452 TMCO5B-205ENST00000530020 894 ntBASIC14.43□□□□□ -0.1
HOXD12P35452 AC003686.1-201ENST00000550956 1034 ntBASIC14.43□□□□□ -0.1
HOXD12P35452 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXD12P35452 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.43□□□□□ -0.1
HOXD12P35452 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.43□□□□□ -0.1
HOXD12P35452 RN7SL470P-201ENST00000583069 259 ntBASIC14.43□□□□□ -0.1
HOXD12P35452 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXD12P35452 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HOXD12P35452 AC025262.2-201ENST00000623975 1056 ntBASIC14.43□□□□□ -0.1
HOXD12P35452 AL161773.1-201ENST00000624845 863 ntBASIC14.43□□□□□ -0.1
HOXD12P35452 AC023090.2-201ENST00000625182 2110 ntBASIC14.43□□□□□ -0.1
HOXD12P35452 AL161772.1-201ENST00000610494 4412 ntBASIC14.43□□□□□ -0.1
HOXD12P35452 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 AC090502.4-201ENST00000551714 1386 ntBASIC14.43□□□□□ -0.1
HOXD12P35452 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXD12P35452 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXD12P35452 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.43□□□□□ -0.1
HOXD12P35452 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HOXD12P35452 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.42□□□□□ -0.1
HOXD12P35452 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXD12P35452 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HOXD12P35452 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 HIST2H2BA-201ENST00000412169 381 ntBASIC14.42□□□□□ -0.1
HOXD12P35452 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.42□□□□□ -0.1
HOXD12P35452 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXD12P35452 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXD12P35452 AL354861.1-201ENST00000445213 355 ntBASIC14.42□□□□□ -0.1
HOXD12P35452 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 RN7SL530P-201ENST00000485097 298 ntBASIC14.42□□□□□ -0.1
HOXD12P35452 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.42□□□□□ -0.1
HOXD12P35452 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 AC138466.5-201ENST00000624002 808 ntBASIC14.42□□□□□ -0.1
HOXD12P35452 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HOXD12P35452 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HOXD12P35452 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXD12P35452 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HOXD12P35452 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXD12P35452 AL109954.1-202ENST00000564051 2148 ntBASIC14.42□□□□□ -0.1
HOXD12P35452 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HOXD12P35452 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXD12P35452 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXD12P35452 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HOXD12P35452 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXD12P35452 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HOXD12P35452 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HOXD12P35452 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXD12P35452 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HOXD12P35452 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 AC090616.6-203ENST00000579186 1945 ntBASIC14.41□□□□□ -0.1
HOXD12P35452 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms