Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 TUBB1P2-201ENST00000422712 1306 ntBASIC13.4□□□□□ -0.26
GABRA3P34903 TUBB1P1-201ENST00000503144 1300 ntBASIC13.4□□□□□ -0.26
GABRA3P34903 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
GABRA3P34903 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
GABRA3P34903 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.4□□□□□ -0.26
GABRA3P34903 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
GABRA3P34903 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
GABRA3P34903 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.4□□□□□ -0.26
GABRA3P34903 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.4□□□□□ -0.26
GABRA3P34903 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.4□□□□□ -0.26
GABRA3P34903 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.4□□□□□ -0.26
GABRA3P34903 RPS2P32-201ENST00000439199 892 ntBASIC13.4□□□□□ -0.26
GABRA3P34903 AL591846.1-201ENST00000451736 433 ntBASIC13.4□□□□□ -0.26
GABRA3P34903 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GABRA3P34903 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.4□□□□□ -0.26
GABRA3P34903 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.4□□□□□ -0.26
GABRA3P34903 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.4□□□□□ -0.26
GABRA3P34903 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.4□□□□□ -0.26
GABRA3P34903 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.4□□□□□ -0.26
GABRA3P34903 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.4□□□□□ -0.26
GABRA3P34903 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.4□□□□□ -0.26
GABRA3P34903 AC005324.6-201ENST00000587972 613 ntBASIC13.4□□□□□ -0.26
GABRA3P34903 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.4□□□□□ -0.26
GABRA3P34903 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.4□□□□□ -0.26
GABRA3P34903 AC007663.3-201ENST00000609632 465 ntBASIC13.4□□□□□ -0.26
GABRA3P34903 AC091271.1-201ENST00000611877 1162 ntBASIC13.4□□□□□ -0.26
GABRA3P34903 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.4□□□□□ -0.26
GABRA3P34903 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
GABRA3P34903 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
GABRA3P34903 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.4□□□□□ -0.26
GABRA3P34903 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.4□□□□□ -0.26
GABRA3P34903 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
GABRA3P34903 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.4□□□□□ -0.26
GABRA3P34903 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
GABRA3P34903 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
GABRA3P34903 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GABRA3P34903 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
GABRA3P34903 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.27
GABRA3P34903 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
GABRA3P34903 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.4□□□□□ -0.27
GABRA3P34903 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GABRA3P34903 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABRA3P34903 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.39□□□□□ -0.27
GABRA3P34903 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABRA3P34903 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABRA3P34903 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABRA3P34903 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
GABRA3P34903 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
GABRA3P34903 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABRA3P34903 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABRA3P34903 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABRA3P34903 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.39□□□□□ -0.27
GABRA3P34903 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
GABRA3P34903 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
GABRA3P34903 AC004899.1-201ENST00000424687 1714 ntBASIC13.39□□□□□ -0.27
GABRA3P34903 AC010327.5-201ENST00000586923 3061 ntBASIC13.39□□□□□ -0.27
GABRA3P34903 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
GABRA3P34903 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABRA3P34903 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABRA3P34903 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABRA3P34903 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABRA3P34903 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABRA3P34903 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.39□□□□□ -0.27
GABRA3P34903 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.39□□□□□ -0.27
GABRA3P34903 POM121L10P-201ENST00000436994 1285 ntBASIC13.39□□□□□ -0.27
GABRA3P34903 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GABRA3P34903 FAM8A2P-201ENST00000528813 1142 ntBASIC13.39□□□□□ -0.27
GABRA3P34903 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.39□□□□□ -0.27
GABRA3P34903 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.39□□□□□ -0.27
GABRA3P34903 AC003686.1-201ENST00000550956 1034 ntBASIC13.39□□□□□ -0.27
GABRA3P34903 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.39□□□□□ -0.27
GABRA3P34903 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.39□□□□□ -0.27
GABRA3P34903 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.39□□□□□ -0.27
GABRA3P34903 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.39□□□□□ -0.27
GABRA3P34903 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.39□□□□□ -0.27
GABRA3P34903 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GABRA3P34903 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABRA3P34903 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms