Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.48□□□□□ -0.25
NR4A1P22736 AC092552.1-201ENST00000547243 906 ntBASIC13.48□□□□□ -0.25
NR4A1P22736 AC005225.4-201ENST00000557330 545 ntBASIC13.48□□□□□ -0.25
NR4A1P22736 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.48□□□□□ -0.25
NR4A1P22736 AC015910.1-201ENST00000579400 975 ntBASIC13.48□□□□□ -0.25
NR4A1P22736 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.48□□□□□ -0.25
NR4A1P22736 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
NR4A1P22736 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NR4A1P22736 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NR4A1P22736 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NR4A1P22736 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NR4A1P22736 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NR4A1P22736 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NR4A1P22736 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NR4A1P22736 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NR4A1P22736 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NR4A1P22736 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NR4A1P22736 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NR4A1P22736 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
NR4A1P22736 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NR4A1P22736 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NR4A1P22736 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.48□□□□□ -0.25
NR4A1P22736 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NR4A1P22736 AC125807.2-201ENST00000513358 3514 ntBASIC13.48□□□□□ -0.25
NR4A1P22736 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NR4A1P22736 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.48□□□□□ -0.25
NR4A1P22736 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.48□□□□□ -0.25
NR4A1P22736 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NR4A1P22736 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NR4A1P22736 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NR4A1P22736 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NR4A1P22736 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NR4A1P22736 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.47□□□□□ -0.25
NR4A1P22736 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 AC022400.8-201ENST00000623453 3599 ntBASIC13.47□□□□□ -0.25
NR4A1P22736 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NR4A1P22736 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.47□□□□□ -0.25
NR4A1P22736 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NR4A1P22736 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NR4A1P22736 AC102953.2-201ENST00000609755 3026 ntBASIC13.47□□□□□ -0.25
NR4A1P22736 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
NR4A1P22736 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.47□□□□□ -0.25
NR4A1P22736 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NR4A1P22736 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 AP006294.1-201ENST00000415407 339 ntBASIC13.47□□□□□ -0.25
NR4A1P22736 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.47□□□□□ -0.25
NR4A1P22736 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.47□□□□□ -0.25
NR4A1P22736 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.47□□□□□ -0.25
NR4A1P22736 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NR4A1P22736 RPL13AP25-201ENST00000484130 612 ntBASIC13.47□□□□□ -0.25
NR4A1P22736 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.47□□□□□ -0.25
NR4A1P22736 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.47□□□□□ -0.25
NR4A1P22736 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.47□□□□□ -0.25
NR4A1P22736 AC025181.2-201ENST00000606994 802 ntBASIC13.47□□□□□ -0.25
NR4A1P22736 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC13.47□□□□□ -0.25
NR4A1P22736 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.47□□□□□ -0.25
NR4A1P22736 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NR4A1P22736 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.47□□□□□ -0.25
NR4A1P22736 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.47□□□□□ -0.25
NR4A1P22736 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
NR4A1P22736 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NR4A1P22736 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.47□□□□□ -0.25
NR4A1P22736 AL031719.1-201ENST00000623365 2587 ntBASIC13.47□□□□□ -0.25
NR4A1P22736 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NR4A1P22736 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
NR4A1P22736 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.47□□□□□ -0.25
NR4A1P22736 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NR4A1P22736 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.47□□□□□ -0.25
NR4A1P22736 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NR4A1P22736 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NR4A1P22736 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
NR4A1P22736 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NR4A1P22736 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.46□□□□□ -0.25
NR4A1P22736 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.46□□□□□ -0.25
NR4A1P22736 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NR4A1P22736 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
NR4A1P22736 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NR4A1P22736 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.46□□□□□ -0.25
NR4A1P22736 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NR4A1P22736 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
NR4A1P22736 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NR4A1P22736 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms