Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 BEND3P1-201ENST00000421591 1944 ntBASIC14.53□□□□□ -0.08
HLA-DPA1P20036 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 AC018629.1-201ENST00000623381 1736 ntBASIC14.53□□□□□ -0.08
HLA-DPA1P20036 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.53□□□□□ -0.08
HLA-DPA1P20036 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 OR2R1P-201ENST00000441404 914 ntBASIC14.53□□□□□ -0.08
HLA-DPA1P20036 AC092658.1-201ENST00000505836 891 ntBASIC14.53□□□□□ -0.08
HLA-DPA1P20036 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 RN7SL219P-201ENST00000582872 296 ntBASIC14.53□□□□□ -0.08
HLA-DPA1P20036 AC068587.8-201ENST00000641239 219 ntBASIC14.53□□□□□ -0.08
HLA-DPA1P20036 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 MIR193BHG-211ENST00000641433 5365 ntBASIC14.53□□□□□ -0.08
HLA-DPA1P20036 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DPA1P20036 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPA1P20036 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.52□□□□□ -0.08
HLA-DPA1P20036 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
HLA-DPA1P20036 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.52□□□□□ -0.08
HLA-DPA1P20036 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
HLA-DPA1P20036 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
HLA-DPA1P20036 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPA1P20036 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPA1P20036 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPA1P20036 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
HLA-DPA1P20036 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPA1P20036 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 AC078875.1-201ENST00000431907 724 ntBASIC14.52□□□□□ -0.09
HLA-DPA1P20036 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 AC126915.1-201ENST00000522847 1038 ntBASIC14.52□□□□□ -0.09
HLA-DPA1P20036 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 AC090164.2-201ENST00000611487 516 ntBASIC14.52□□□□□ -0.09
HLA-DPA1P20036 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms