Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP2B1P20020 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2B1P20020 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2B1P20020 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP2B1P20020 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2B1P20020 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2B1P20020 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ATP2B1P20020 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP2B1P20020 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2B1P20020 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.65■□□□□ 0.26
ATP2B1P20020 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.65■□□□□ 0.26
ATP2B1P20020 AC079178.1-201ENST00000420915 656 ntBASIC16.65■□□□□ 0.26
ATP2B1P20020 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.65■□□□□ 0.26
ATP2B1P20020 RPL13AP20-201ENST00000459725 609 ntBASIC16.65■□□□□ 0.26
ATP2B1P20020 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2B1P20020 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.65■□□□□ 0.26
ATP2B1P20020 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.65■□□□□ 0.26
ATP2B1P20020 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.65■□□□□ 0.26
ATP2B1P20020 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.65■□□□□ 0.26
ATP2B1P20020 MIR6720-201ENST00000611664 98 ntBASIC16.65■□□□□ 0.26
ATP2B1P20020 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ATP2B1P20020 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
ATP2B1P20020 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP2B1P20020 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2B1P20020 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ATP2B1P20020 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP2B1P20020 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ATP2B1P20020 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ATP2B1P20020 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.26
ATP2B1P20020 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
ATP2B1P20020 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
ATP2B1P20020 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2B1P20020 AC092053.3-201ENST00000641308 4975 ntBASIC16.64■□□□□ 0.25
ATP2B1P20020 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2B1P20020 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ATP2B1P20020 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2B1P20020 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ATP2B1P20020 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2B1P20020 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2B1P20020 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2B1P20020 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.64■□□□□ 0.25
ATP2B1P20020 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.64■□□□□ 0.25
ATP2B1P20020 AC005586.2-201ENST00000563946 837 ntBASIC16.64■□□□□ 0.25
ATP2B1P20020 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.64■□□□□ 0.25
ATP2B1P20020 DUX4L45-201ENST00000566406 1057 ntBASIC16.64■□□□□ 0.25
ATP2B1P20020 RN7SL560P-201ENST00000577943 264 ntBASIC16.64■□□□□ 0.25
ATP2B1P20020 AC009955.4-201ENST00000597192 544 ntBASIC16.64■□□□□ 0.25
ATP2B1P20020 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.64■□□□□ 0.25
ATP2B1P20020 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2B1P20020 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ATP2B1P20020 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2B1P20020 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2B1P20020 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2B1P20020 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2B1P20020 AL008718.2-201ENST00000609206 1313 ntBASIC16.64■□□□□ 0.25
ATP2B1P20020 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2B1P20020 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2B1P20020 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2B1P20020 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ATP2B1P20020 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2B1P20020 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.64■□□□□ 0.25
ATP2B1P20020 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP2B1P20020 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2B1P20020 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ATP2B1P20020 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP2B1P20020 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2B1P20020 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2B1P20020 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms