Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC144522.1-201ENST00000625111 1658 ntBASIC12.77□□□□□ -0.36
CTLA4P16410 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.77□□□□□ -0.36
CTLA4P16410 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CTLA4P16410 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CTLA4P16410 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
CTLA4P16410 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CTLA4P16410 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.77□□□□□ -0.36
CTLA4P16410 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CTLA4P16410 AC131212.3-201ENST00000624087 4219 ntBASIC12.77□□□□□ -0.36
CTLA4P16410 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.77□□□□□ -0.37
CTLA4P16410 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CTLA4P16410 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CTLA4P16410 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CTLA4P16410 AL354877.1-201ENST00000424412 413 ntBASIC12.77□□□□□ -0.37
CTLA4P16410 HLA-V-201ENST00000429037 534 ntBASIC12.77□□□□□ -0.37
CTLA4P16410 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.77□□□□□ -0.37
CTLA4P16410 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.77□□□□□ -0.37
CTLA4P16410 AC012441.2-201ENST00000444843 739 ntBASIC12.77□□□□□ -0.37
CTLA4P16410 CSF2RBP1-201ENST00000447905 391 ntBASIC12.77□□□□□ -0.37
CTLA4P16410 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.77□□□□□ -0.37
CTLA4P16410 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.77□□□□□ -0.37
CTLA4P16410 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.77□□□□□ -0.37
CTLA4P16410 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.77□□□□□ -0.37
CTLA4P16410 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.77□□□□□ -0.37
CTLA4P16410 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.77□□□□□ -0.37
CTLA4P16410 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.77□□□□□ -0.37
CTLA4P16410 EEF1DP1-201ENST00000585891 896 ntBASIC12.77□□□□□ -0.37
CTLA4P16410 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.77□□□□□ -0.37
CTLA4P16410 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.77□□□□□ -0.37
CTLA4P16410 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CTLA4P16410 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CTLA4P16410 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CTLA4P16410 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CTLA4P16410 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CTLA4P16410 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CTLA4P16410 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CTLA4P16410 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CTLA4P16410 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CTLA4P16410 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CTLA4P16410 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CTLA4P16410 CYP4F23P-201ENST00000593402 1579 ntBASIC12.77□□□□□ -0.37
CTLA4P16410 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CTLA4P16410 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.77□□□□□ -0.37
CTLA4P16410 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.77□□□□□ -0.37
CTLA4P16410 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CTLA4P16410 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
CTLA4P16410 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 AC073548.1-201ENST00000624088 1882 ntBASIC12.76□□□□□ -0.37
CTLA4P16410 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.76□□□□□ -0.37
CTLA4P16410 AL365181.3-201ENST00000605886 3222 ntBASIC12.76□□□□□ -0.37
CTLA4P16410 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.76□□□□□ -0.37
CTLA4P16410 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CTLA4P16410 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.76□□□□□ -0.37
CTLA4P16410 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 FAM58BP-201ENST00000439056 645 ntBASIC12.76□□□□□ -0.37
CTLA4P16410 ACA64.2-201ENST00000459014 129 ntBASIC12.76□□□□□ -0.37
CTLA4P16410 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 AC006122.1-201ENST00000493323 440 ntBASIC12.76□□□□□ -0.37
CTLA4P16410 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.76□□□□□ -0.37
CTLA4P16410 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.76□□□□□ -0.37
CTLA4P16410 AL160314.3-201ENST00000556041 767 ntBASIC12.76□□□□□ -0.37
CTLA4P16410 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.76□□□□□ -0.37
CTLA4P16410 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.76□□□□□ -0.37
CTLA4P16410 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.76□□□□□ -0.37
CTLA4P16410 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.76□□□□□ -0.37
CTLA4P16410 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.76□□□□□ -0.37
CTLA4P16410 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CTLA4P16410 CCT8L1P-201ENST00000465400 1674 ntBASIC12.76□□□□□ -0.37
CTLA4P16410 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.76□□□□□ -0.37
CTLA4P16410 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.76□□□□□ -0.37
CTLA4P16410 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTLA4P16410 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.76□□□□□ -0.37
CTLA4P16410 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.76□□□□□ -0.37
CTLA4P16410 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.76□□□□□ -0.37
CTLA4P16410 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms