Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.29□□□□□ -0.28
THBS1P07996 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.29□□□□□ -0.28
THBS1P07996 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
THBS1P07996 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
THBS1P07996 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.29□□□□□ -0.28
THBS1P07996 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
THBS1P07996 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
THBS1P07996 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.29□□□□□ -0.28
THBS1P07996 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.29□□□□□ -0.28
THBS1P07996 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
THBS1P07996 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.28□□□□□ -0.28
THBS1P07996 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
THBS1P07996 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.28□□□□□ -0.28
THBS1P07996 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
THBS1P07996 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
THBS1P07996 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 AL354877.1-201ENST00000424412 413 ntBASIC13.28□□□□□ -0.28
THBS1P07996 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
THBS1P07996 AK2P2-201ENST00000439142 405 ntBASIC13.28□□□□□ -0.28
THBS1P07996 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.28□□□□□ -0.28
THBS1P07996 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.28□□□□□ -0.28
THBS1P07996 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
THBS1P07996 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.28□□□□□ -0.28
THBS1P07996 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
THBS1P07996 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.28□□□□□ -0.28
THBS1P07996 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.28□□□□□ -0.28
THBS1P07996 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.28□□□□□ -0.28
THBS1P07996 AC100827.2-201ENST00000563214 1194 ntBASIC13.28□□□□□ -0.28
THBS1P07996 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.28□□□□□ -0.28
THBS1P07996 MIR4538-201ENST00000581377 78 ntBASIC13.28□□□□□ -0.28
THBS1P07996 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.28□□□□□ -0.28
THBS1P07996 AL606495.2-201ENST00000605867 535 ntBASIC13.28□□□□□ -0.28
THBS1P07996 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC13.28□□□□□ -0.28
THBS1P07996 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
THBS1P07996 AL162426.1-201ENST00000624141 743 ntBASIC13.28□□□□□ -0.28
THBS1P07996 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
THBS1P07996 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.28□□□□□ -0.28
THBS1P07996 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
THBS1P07996 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.28□□□□□ -0.28
THBS1P07996 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.28□□□□□ -0.28
THBS1P07996 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.28□□□□□ -0.28
THBS1P07996 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
THBS1P07996 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
THBS1P07996 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
THBS1P07996 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
THBS1P07996 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
THBS1P07996 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
THBS1P07996 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
THBS1P07996 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
THBS1P07996 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
THBS1P07996 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
THBS1P07996 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
THBS1P07996 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
THBS1P07996 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.27□□□□□ -0.28
THBS1P07996 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
THBS1P07996 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
THBS1P07996 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
THBS1P07996 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
THBS1P07996 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
THBS1P07996 AC015909.5-201ENST00000624336 2266 ntBASIC13.27□□□□□ -0.28
THBS1P07996 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
THBS1P07996 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
THBS1P07996 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.27□□□□□ -0.29
THBS1P07996 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.27□□□□□ -0.29
THBS1P07996 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
THBS1P07996 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.27□□□□□ -0.29
THBS1P07996 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms