Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RPSAP70-201ENST00000504462 864 ntBASIC14.21□□□□□ -0.13
PDGFBP01127 TBC1D3P6-201ENST00000505954 962 ntBASIC14.21□□□□□ -0.13
PDGFBP01127 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 MYL6-215ENST00000549566 685 ntTSL 2 BASIC14.21□□□□□ -0.13
PDGFBP01127 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC14.21□□□□□ -0.13
PDGFBP01127 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC14.21□□□□□ -0.13
PDGFBP01127 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC14.21□□□□□ -0.13
PDGFBP01127 AC113385.2-201ENST00000614465 762 ntBASIC14.21□□□□□ -0.13
PDGFBP01127 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PDGFBP01127 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.21□□□□□ -0.13
PDGFBP01127 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC14.21□□□□□ -0.13
PDGFBP01127 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PDGFBP01127 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.21□□□□□ -0.13
PDGFBP01127 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDGFBP01127 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
PDGFBP01127 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PDGFBP01127 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
PDGFBP01127 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PDGFBP01127 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.21□□□□□ -0.14
PDGFBP01127 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.21□□□□□ -0.14
PDGFBP01127 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.21□□□□□ -0.14
PDGFBP01127 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PDGFBP01127 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.21□□□□□ -0.14
PDGFBP01127 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDGFBP01127 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDGFBP01127 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDGFBP01127 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDGFBP01127 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
PDGFBP01127 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDGFBP01127 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PDGFBP01127 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
PDGFBP01127 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PDGFBP01127 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFBP01127 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PDGFBP01127 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 RPL13AP3-202ENST00000494676 1473 ntBASIC14.2□□□□□ -0.14
PDGFBP01127 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.2□□□□□ -0.14
PDGFBP01127 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PDGFBP01127 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PDGFBP01127 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 OR2W2P-201ENST00000406313 909 ntBASIC14.2□□□□□ -0.14
PDGFBP01127 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.2□□□□□ -0.14
PDGFBP01127 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC14.2□□□□□ -0.14
PDGFBP01127 AC103563.1-201ENST00000429316 123 ntBASIC14.2□□□□□ -0.14
PDGFBP01127 AL954722.1-201ENST00000431238 259 ntBASIC14.2□□□□□ -0.14
PDGFBP01127 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFBP01127 POLR2LP1-206ENST00000444785 187 ntBASIC14.2□□□□□ -0.14
PDGFBP01127 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 RN7SL478P-201ENST00000584358 298 ntBASIC14.2□□□□□ -0.14
PDGFBP01127 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFBP01127 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC14.2□□□□□ -0.14
PDGFBP01127 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PDGFBP01127 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFBP01127 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
PDGFBP01127 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFBP01127 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFBP01127 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PDGFBP01127 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PDGFBP01127 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PDGFBP01127 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFBP01127 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.19□□□□□ -0.14
PDGFBP01127 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.19□□□□□ -0.14
PDGFBP01127 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PDGFBP01127 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PDGFBP01127 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
PDGFBP01127 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms