Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GPC4O75487 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
GPC4O75487 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GPC4O75487 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GPC4O75487 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.52□□□□□ -0.08
GPC4O75487 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GPC4O75487 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
GPC4O75487 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.52□□□□□ -0.09
GPC4O75487 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.52□□□□□ -0.09
GPC4O75487 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.52□□□□□ -0.09
GPC4O75487 AL355994.2-201ENST00000447882 704 ntBASIC14.52□□□□□ -0.09
GPC4O75487 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
GPC4O75487 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 HOMER2P2-201ENST00000451621 847 ntBASIC14.52□□□□□ -0.09
GPC4O75487 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 DUX4L45-201ENST00000566406 1057 ntBASIC14.52□□□□□ -0.09
GPC4O75487 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.52□□□□□ -0.09
GPC4O75487 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.52□□□□□ -0.09
GPC4O75487 AC008825.2-201ENST00000603374 718 ntBASIC14.52□□□□□ -0.09
GPC4O75487 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 AC133552.6-201ENST00000613406 534 ntBASIC14.52□□□□□ -0.09
GPC4O75487 MIR6805-201ENST00000615055 62 ntBASIC14.52□□□□□ -0.09
GPC4O75487 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.52□□□□□ -0.09
GPC4O75487 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.52□□□□□ -0.09
GPC4O75487 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.52□□□□□ -0.09
GPC4O75487 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
GPC4O75487 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
GPC4O75487 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 AC139712.1-201ENST00000378256 1875 ntBASIC14.52□□□□□ -0.09
GPC4O75487 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.52□□□□□ -0.09
GPC4O75487 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GPC4O75487 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
GPC4O75487 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.52□□□□□ -0.09
GPC4O75487 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
GPC4O75487 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
GPC4O75487 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.51□□□□□ -0.09
GPC4O75487 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.51□□□□□ -0.09
GPC4O75487 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
GPC4O75487 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.51□□□□□ -0.09
GPC4O75487 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.51□□□□□ -0.09
GPC4O75487 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
GPC4O75487 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
GPC4O75487 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 MIR658-201ENST00000385210 100 ntBASIC14.51□□□□□ -0.09
GPC4O75487 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.51□□□□□ -0.09
GPC4O75487 KRT223P-202ENST00000449164 1292 ntBASIC14.51□□□□□ -0.09
GPC4O75487 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.51□□□□□ -0.09
GPC4O75487 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.51□□□□□ -0.09
GPC4O75487 AP006547.1-201ENST00000563435 692 ntBASIC14.51□□□□□ -0.09
GPC4O75487 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.51□□□□□ -0.09
GPC4O75487 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.51□□□□□ -0.09
GPC4O75487 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.51□□□□□ -0.09
GPC4O75487 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.51□□□□□ -0.09
GPC4O75487 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.51□□□□□ -0.09
GPC4O75487 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
GPC4O75487 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
GPC4O75487 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GPC4O75487 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC14.51□□□□□ -0.09
GPC4O75487 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
GPC4O75487 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
GPC4O75487 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
GPC4O75487 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.5□□□□□ -0.09
GPC4O75487 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms