Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 AC102953.2-201ENST00000609755 3026 ntBASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 GOLGA8EP-201ENST00000530246 1959 ntBASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 AC007969.1-201ENST00000433675 447 ntBASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 RNPS1P1-201ENST00000507437 918 ntBASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 AC117500.6-201ENST00000624871 588 ntBASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 PER1-202ENST00000354903 3115 ntTSL 2 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 Z97205.2-201ENST00000564697 1639 ntBASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TMEM256-PLSCR3K7ERE1 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms