Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 MYADML-201ENST00000474610 2147 ntBASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 TMBIM7P-202ENST00000641474 1516 ntBASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 FTLP1-201ENST00000449155 526 ntBASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 PRKXP1-201ENST00000561423 1122 ntBASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 AC005912.2-201ENST00000619492 2400 ntBASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NPIPA2E9PIF3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.15□□□□□ -0.31
NPIPA2E9PIF3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 AP001267.2-201ENST00000532619 2086 ntBASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 AC097359.2-201ENST00000604992 2389 ntBASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 TMEM198B-204ENST00000484016 896 ntBASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 AC092299.1-201ENST00000632679 757 ntBASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 AL009178.2-201ENST00000597278 2719 ntBASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms