Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 RHPN1-AS1-201ENST00000518049 1918 ntBASIC15.71■□□□□ 0.11
CCDC66A2RUB6 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 SPDYE19P-201ENST00000338590 713 ntBASIC15.71■□□□□ 0.11
CCDC66A2RUB6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 MRPS18AP1-201ENST00000414458 589 ntBASIC15.71■□□□□ 0.11
CCDC66A2RUB6 AC114812.1-204ENST00000449669 728 ntBASIC15.71■□□□□ 0.11
CCDC66A2RUB6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 AC093214.1-201ENST00000511688 1107 ntBASIC15.71■□□□□ 0.11
CCDC66A2RUB6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 SPDYE22P-201ENST00000582158 798 ntBASIC15.71■□□□□ 0.11
CCDC66A2RUB6 AC005498.2-205ENST00000593218 784 ntBASIC15.71■□□□□ 0.11
CCDC66A2RUB6 AC092364.2-202ENST00000597012 1073 ntBASIC15.71■□□□□ 0.11
CCDC66A2RUB6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC66A2RUB6 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CCDC66A2RUB6 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
CCDC66A2RUB6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC66A2RUB6 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.71■□□□□ 0.1
CCDC66A2RUB6 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
CCDC66A2RUB6 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC66A2RUB6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC66A2RUB6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC66A2RUB6 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC66A2RUB6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 MIR770-201ENST00000390219 98 ntBASIC15.7■□□□□ 0.1
CCDC66A2RUB6 TLE1P1-201ENST00000422965 589 ntBASIC15.7■□□□□ 0.1
CCDC66A2RUB6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 AC099568.2-201ENST00000609194 695 ntBASIC15.7■□□□□ 0.1
CCDC66A2RUB6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC66A2RUB6 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms