Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC20.81■□□□□ 0.92
HFM1A2PYH4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC20.81■□□□□ 0.92
HFM1A2PYH4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HFM1A2PYH4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
HFM1A2PYH4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HFM1A2PYH4 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HFM1A2PYH4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
HFM1A2PYH4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HFM1A2PYH4 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HFM1A2PYH4 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HFM1A2PYH4 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
HFM1A2PYH4 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HFM1A2PYH4 SNORA50C-201ENST00000408535 133 ntBASIC20.81■□□□□ 0.92
HFM1A2PYH4 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC20.81■□□□□ 0.92
HFM1A2PYH4 AC018463.1-201ENST00000456674 917 ntBASIC20.81■□□□□ 0.92
HFM1A2PYH4 RPS23-204ENST00000507980 836 ntTSL 2 BASIC20.81■□□□□ 0.92
HFM1A2PYH4 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC20.81■□□□□ 0.92
HFM1A2PYH4 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC20.81■□□□□ 0.92
HFM1A2PYH4 AL009176.1-201ENST00000607876 650 ntBASIC20.81■□□□□ 0.92
HFM1A2PYH4 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
HFM1A2PYH4 SNORA50.1-201ENST00000628590 135 ntBASIC20.81■□□□□ 0.92
HFM1A2PYH4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HFM1A2PYH4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HFM1A2PYH4 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC20.81■□□□□ 0.92
HFM1A2PYH4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HFM1A2PYH4 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC20.81■□□□□ 0.92
HFM1A2PYH4 LINC02486-201ENST00000604157 3000 ntBASIC20.81■□□□□ 0.92
HFM1A2PYH4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HFM1A2PYH4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HFM1A2PYH4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HFM1A2PYH4 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HFM1A2PYH4 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC20.81■□□□□ 0.92
HFM1A2PYH4 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC20.81■□□□□ 0.92
HFM1A2PYH4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC20.81■□□□□ 0.92
HFM1A2PYH4 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HFM1A2PYH4 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 PHB-210ENST00000511832 1509 ntTSL 2 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HFM1A2PYH4 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HFM1A2PYH4 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 AC092638.2-201ENST00000441105 947 ntBASIC20.8■□□□□ 0.92
HFM1A2PYH4 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 DBP-202ENST00000593500 712 ntTSL 2 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 AL359091.4-201ENST00000610052 409 ntBASIC20.8■□□□□ 0.92
HFM1A2PYH4 AP001065.2-201ENST00000617205 644 ntBASIC20.8■□□□□ 0.92
HFM1A2PYH4 AC015656.1-201ENST00000624209 3578 ntBASIC20.8■□□□□ 0.92
HFM1A2PYH4 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
HFM1A2PYH4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HFM1A2PYH4 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HFM1A2PYH4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HFM1A2PYH4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HFM1A2PYH4 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HFM1A2PYH4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HFM1A2PYH4 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HFM1A2PYH4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HFM1A2PYH4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HFM1A2PYH4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HFM1A2PYH4 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HFM1A2PYH4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC20.8■□□□□ 0.92
HFM1A2PYH4 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HFM1A2PYH4 AC007279.1-201ENST00000448547 837 ntBASIC20.79■□□□□ 0.92
HFM1A2PYH4 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC20.79■□□□□ 0.92
HFM1A2PYH4 OR2A1-AS1-210ENST00000496968 531 ntBASIC20.79■□□□□ 0.92
HFM1A2PYH4 HINT1-205ENST00000508488 703 ntTSL 2 BASIC20.79■□□□□ 0.92
HFM1A2PYH4 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HFM1A2PYH4 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
HFM1A2PYH4 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC20.79■□□□□ 0.92
HFM1A2PYH4 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC20.79■□□□□ 0.92
HFM1A2PYH4 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC20.79■□□□□ 0.92
HFM1A2PYH4 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC20.79■□□□□ 0.92
HFM1A2PYH4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HFM1A2PYH4 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HFM1A2PYH4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HFM1A2PYH4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HFM1A2PYH4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HFM1A2PYH4 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC20.79■□□□□ 0.92
HFM1A2PYH4 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC20.79■□□□□ 0.92
HFM1A2PYH4 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HFM1A2PYH4 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC20.78■□□□□ 0.92
HFM1A2PYH4 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms