Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 AP001889.1-201ENST00000525414 633 ntBASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 MIR4745-201ENST00000577608 62 ntBASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 GNRHR2-203ENST00000581100 1187 ntBASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 KRT18P8-201ENST00000581937 1246 ntBASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 AC004241.5-201ENST00000623870 2448 ntBASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAF6Q9Y4K3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 AC135782.3-201ENST00000562782 2105 ntBASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 CD8B2-202ENST00000417670 633 ntBASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 AC002472.2-201ENST00000442739 958 ntBASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 AL355864.2-201ENST00000447420 863 ntBASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 AC190387.1-201ENST00000551683 408 ntBASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 NUTM2HP-201ENST00000442076 2498 ntBASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAF6Q9Y4K3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF6Q9Y4K3 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF6Q9Y4K3 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF6Q9Y4K3 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF6Q9Y4K3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms