Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IFT52Q9Y366 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
IFT52Q9Y366 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.58□□□□□ -0.24
IFT52Q9Y366 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IFT52Q9Y366 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
IFT52Q9Y366 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
IFT52Q9Y366 AC023794.5-201ENST00000564380 2157 ntBASIC13.58□□□□□ -0.24
IFT52Q9Y366 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
IFT52Q9Y366 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
IFT52Q9Y366 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.58□□□□□ -0.24
IFT52Q9Y366 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.58□□□□□ -0.24
IFT52Q9Y366 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
IFT52Q9Y366 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.58□□□□□ -0.24
IFT52Q9Y366 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.58□□□□□ -0.24
IFT52Q9Y366 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 AC009093.10-201ENST00000641956 1442 ntBASIC13.57□□□□□ -0.24
IFT52Q9Y366 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.57□□□□□ -0.24
IFT52Q9Y366 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 RN7SL837P-201ENST00000463010 287 ntBASIC13.57□□□□□ -0.24
IFT52Q9Y366 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 SLC25A47P1-201ENST00000531577 414 ntBASIC13.57□□□□□ -0.24
IFT52Q9Y366 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 AC027237.1-201ENST00000560942 655 ntBASIC13.57□□□□□ -0.24
IFT52Q9Y366 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 GNRHR2-203ENST00000581100 1187 ntBASIC13.57□□□□□ -0.24
IFT52Q9Y366 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 AC008825.2-201ENST00000603374 718 ntBASIC13.57□□□□□ -0.24
IFT52Q9Y366 AL022328.1-201ENST00000610050 478 ntBASIC13.57□□□□□ -0.24
IFT52Q9Y366 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 HSPA8P5-201ENST00000456928 2069 ntBASIC13.57□□□□□ -0.24
IFT52Q9Y366 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.57□□□□□ -0.24
IFT52Q9Y366 AC073548.1-201ENST00000624088 1882 ntBASIC13.57□□□□□ -0.24
IFT52Q9Y366 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IFT52Q9Y366 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
IFT52Q9Y366 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFT52Q9Y366 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFT52Q9Y366 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.56□□□□□ -0.24
IFT52Q9Y366 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IFT52Q9Y366 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFT52Q9Y366 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
IFT52Q9Y366 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IFT52Q9Y366 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.56□□□□□ -0.24
IFT52Q9Y366 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFT52Q9Y366 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFT52Q9Y366 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFT52Q9Y366 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFT52Q9Y366 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IFT52Q9Y366 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
IFT52Q9Y366 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.56□□□□□ -0.24
IFT52Q9Y366 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
IFT52Q9Y366 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.56□□□□□ -0.24
IFT52Q9Y366 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IFT52Q9Y366 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IFT52Q9Y366 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IFT52Q9Y366 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.56□□□□□ -0.24
IFT52Q9Y366 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
IFT52Q9Y366 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.56□□□□□ -0.24
IFT52Q9Y366 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.56□□□□□ -0.24
IFT52Q9Y366 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms