Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 AC078819.1-201ENST00000547454 765 ntBASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 AC012085.1-201ENST00000548270 765 ntBASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.95□□□□□ -0.34
POLR1DQ9Y2S0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 AL590440.2-201ENST00000641973 1595 ntBASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 AC027237.1-201ENST00000560942 655 ntBASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 MIR4683-201ENST00000579659 81 ntBASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 MIR3197-201ENST00000582241 73 ntBASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 IGHV3-72-202ENST00000621503 303 ntBASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 AC006453.4-201ENST00000636949 1252 ntBASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 AC041040.2-201ENST00000622926 2899 ntBASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
POLR1DQ9Y2S0 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms