Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 BAATP1-201ENST00000412284 1225 ntBASIC12.91□□□□□ -0.34
COPS3Q9UNS2 AL161932.2-201ENST00000435436 679 ntBASIC12.91□□□□□ -0.34
COPS3Q9UNS2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 TSPY16P-201ENST00000449843 468 ntBASIC12.91□□□□□ -0.34
COPS3Q9UNS2 CYMP-203ENST00000474680 1263 ntBASIC12.91□□□□□ -0.34
COPS3Q9UNS2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 AC106820.3-201ENST00000561653 397 ntBASIC12.91□□□□□ -0.34
COPS3Q9UNS2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 RN7SL48P-201ENST00000579283 293 ntBASIC12.91□□□□□ -0.34
COPS3Q9UNS2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 AC006538.3-201ENST00000612495 578 ntBASIC12.91□□□□□ -0.34
COPS3Q9UNS2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 AL033527.5-201ENST00000641382 801 ntBASIC12.91□□□□□ -0.34
COPS3Q9UNS2 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
COPS3Q9UNS2 AC068760.1-201ENST00000493579 1953 ntBASIC12.9□□□□□ -0.34
COPS3Q9UNS2 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 AL365181.3-201ENST00000605886 3222 ntBASIC12.9□□□□□ -0.34
COPS3Q9UNS2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 AP003171.2-201ENST00000528208 925 ntBASIC12.9□□□□□ -0.34
COPS3Q9UNS2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.9□□□□□ -0.34
COPS3Q9UNS2 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COPS3Q9UNS2 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms