Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 FUCA1P1-201ENST00000374476 1351 ntBASIC14.23□□□□□ -0.13
NCDNQ9UBB6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 RN7SL767P-201ENST00000493013 295 ntBASIC14.23□□□□□ -0.13
NCDNQ9UBB6 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 AC013553.1-201ENST00000560906 267 ntBASIC14.23□□□□□ -0.13
NCDNQ9UBB6 AC124068.2-201ENST00000569473 1109 ntBASIC14.23□□□□□ -0.13
NCDNQ9UBB6 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 AC110057.1-201ENST00000636031 898 ntBASIC14.23□□□□□ -0.13
NCDNQ9UBB6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 WASH3P-207ENST00000560956 1394 ntBASIC14.22□□□□□ -0.13
NCDNQ9UBB6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.22□□□□□ -0.13
NCDNQ9UBB6 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 VENTXP3-201ENST00000546480 773 ntBASIC14.22□□□□□ -0.13
NCDNQ9UBB6 PMEL-214ENST00000550447 901 ntTSL 3 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 AL590235.1-201ENST00000564650 861 ntBASIC14.22□□□□□ -0.13
NCDNQ9UBB6 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 AL353622.2-201ENST00000605846 425 ntBASIC14.22□□□□□ -0.13
NCDNQ9UBB6 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 AP000769.1-203ENST00000637245 208 ntBASIC14.22□□□□□ -0.13
NCDNQ9UBB6 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NCDNQ9UBB6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 281 ms