Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN18Q99952 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN18Q99952 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN18Q99952 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN18Q99952 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN18Q99952 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN18Q99952 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN18Q99952 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN18Q99952 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN18Q99952 GH1-203ENST00000351388 685 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN18Q99952 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN18Q99952 RPL10-203ENST00000406022 748 ntTSL 3 BASIC16.12■□□□□ 0.17
PTPN18Q99952 AL121949.3-201ENST00000406684 385 ntBASIC16.12■□□□□ 0.17
PTPN18Q99952 AC098657.1-201ENST00000416270 1135 ntBASIC16.12■□□□□ 0.17
PTPN18Q99952 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN18Q99952 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC16.12■□□□□ 0.17
PTPN18Q99952 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC16.12■□□□□ 0.17
PTPN18Q99952 CDK4P1-201ENST00000454213 828 ntBASIC16.12■□□□□ 0.17
PTPN18Q99952 HNRNPA3P6-201ENST00000472163 1006 ntBASIC16.12■□□□□ 0.17
PTPN18Q99952 ALG1L15P-201ENST00000482834 794 ntBASIC16.12■□□□□ 0.17
PTPN18Q99952 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.12■□□□□ 0.17
PTPN18Q99952 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC16.12■□□□□ 0.17
PTPN18Q99952 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PTPN18Q99952 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC16.12■□□□□ 0.17
PTPN18Q99952 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN18Q99952 KRT8P34-201ENST00000577607 1044 ntBASIC16.12■□□□□ 0.17
PTPN18Q99952 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC16.12■□□□□ 0.17
PTPN18Q99952 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
PTPN18Q99952 MIR6074-201ENST00000612054 107 ntBASIC16.12■□□□□ 0.17
PTPN18Q99952 AC004466.2-201ENST00000614749 516 ntBASIC16.12■□□□□ 0.17
PTPN18Q99952 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN18Q99952 FER1L4-210ENST00000615531 5998 ntBASIC16.12■□□□□ 0.17
PTPN18Q99952 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN18Q99952 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN18Q99952 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN18Q99952 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PTPN18Q99952 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
PTPN18Q99952 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN18Q99952 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN18Q99952 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
PTPN18Q99952 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN18Q99952 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN18Q99952 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.12■□□□□ 0.17
PTPN18Q99952 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN18Q99952 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN18Q99952 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN18Q99952 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
PTPN18Q99952 AJ011931.1-201ENST00000618749 2492 ntBASIC16.11■□□□□ 0.17
PTPN18Q99952 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PTPN18Q99952 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN18Q99952 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN18Q99952 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN18Q99952 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.11■□□□□ 0.17
PTPN18Q99952 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 HDGF-202ENST00000368206 960 ntTSL 5 BASIC16.11■□□□□ 0.17
PTPN18Q99952 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN18Q99952 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 AL773545.2-201ENST00000442149 472 ntBASIC16.11■□□□□ 0.17
PTPN18Q99952 KRT19P4-201ENST00000443208 943 ntBASIC16.11■□□□□ 0.17
PTPN18Q99952 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN18Q99952 GULOP-201ENST00000454030 748 ntBASIC16.11■□□□□ 0.17
PTPN18Q99952 TREX1-203ENST00000456089 629 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN18Q99952 RNU1-80P-201ENST00000459500 161 ntBASIC16.11■□□□□ 0.17
PTPN18Q99952 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN18Q99952 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN18Q99952 MBP-230ENST00000528160 584 ntTSL 5 BASIC16.11■□□□□ 0.17
PTPN18Q99952 URB1-AS1-201ENST00000534991 831 ntBASIC16.11■□□□□ 0.17
PTPN18Q99952 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN18Q99952 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC16.11■□□□□ 0.17
PTPN18Q99952 AC020904.3-201ENST00000624199 442 ntBASIC16.11■□□□□ 0.17
PTPN18Q99952 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN18Q99952 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PTPN18Q99952 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN18Q99952 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN18Q99952 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
PTPN18Q99952 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PTPN18Q99952 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PTPN18Q99952 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN18Q99952 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.1■□□□□ 0.17
PTPN18Q99952 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.1■□□□□ 0.17
PTPN18Q99952 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PTPN18Q99952 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PTPN18Q99952 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN18Q99952 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PTPN18Q99952 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN18Q99952 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms