Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIN3AQ96ST3 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SIN3AQ96ST3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIN3AQ96ST3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SIN3AQ96ST3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIN3AQ96ST3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SIN3AQ96ST3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC20.7■□□□□ 0.91
SIN3AQ96ST3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 KRT17P5-201ENST00000332088 839 ntBASIC20.7■□□□□ 0.9
SIN3AQ96ST3 AC103592.1-201ENST00000394513 664 ntBASIC20.7■□□□□ 0.9
SIN3AQ96ST3 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 PFN2-206ENST00000461930 606 ntTSL 4 BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 AL161670.2-201ENST00000557650 1227 ntBASIC20.7■□□□□ 0.9
SIN3AQ96ST3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 AC138627.1-207ENST00000641560 1006 ntBASIC20.7■□□□□ 0.9
SIN3AQ96ST3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 SHMT1P1-201ENST00000419974 1312 ntBASIC20.7■□□□□ 0.9
SIN3AQ96ST3 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SIN3AQ96ST3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 SARS-202ENST00000369923 1882 ntTSL 5 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 MBP-201ENST00000354542 575 ntTSL 2 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 BANF1P3-201ENST00000412556 261 ntBASIC20.69■□□□□ 0.9
SIN3AQ96ST3 PHBP15-201ENST00000574228 665 ntBASIC20.69■□□□□ 0.9
SIN3AQ96ST3 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 MIR6769A-201ENST00000617340 73 ntBASIC20.69■□□□□ 0.9
SIN3AQ96ST3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 AC072061.1-201ENST00000569710 2234 ntBASIC20.69■□□□□ 0.9
SIN3AQ96ST3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC20.69■□□□□ 0.9
SIN3AQ96ST3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 MAPT-IT1-201ENST00000624111 3016 ntBASIC20.68■□□□□ 0.9
SIN3AQ96ST3 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 AL008707.1-201ENST00000422498 534 ntBASIC20.68■□□□□ 0.9
SIN3AQ96ST3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 Z97180.1-201ENST00000445173 988 ntBASIC20.68■□□□□ 0.9
SIN3AQ96ST3 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms