Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 AC022080.1-201ENST00000366255 781 ntBASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 NALT1-202ENST00000450304 437 ntTSL 3 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 TYMSP2-201ENST00000589501 424 ntBASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 RARS-210ENST00000626454 177 ntTSL 5 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 ESR1-214ENST00000638569 132 ntTSL 5 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CRAMP1Q96RY5 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.27■□□□□ 0.35
CRAMP1Q96RY5 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CRAMP1Q96RY5 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CRAMP1Q96RY5 AC015909.5-201ENST00000624336 2266 ntBASIC17.27■□□□□ 0.35
CRAMP1Q96RY5 AL139158.3-201ENST00000641212 1562 ntBASIC17.27■□□□□ 0.35
CRAMP1Q96RY5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CRAMP1Q96RY5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CRAMP1Q96RY5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CRAMP1Q96RY5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CRAMP1Q96RY5 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CRAMP1Q96RY5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.27■□□□□ 0.35
CRAMP1Q96RY5 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CRAMP1Q96RY5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 USP17L6P-201ENST00000382470 1197 ntBASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 DKKL1P1-201ENST00000400550 698 ntBASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 AC092570.1-201ENST00000414446 469 ntBASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 MIR5001-201ENST00000580185 100 ntBASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 AL627230.2-201ENST00000613254 655 ntBASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 AC148477.9-201ENST00000623974 539 ntBASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CRAMP1Q96RY5 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 OR10N1P-201ENST00000392758 869 ntBASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 HNRNPA1P58-201ENST00000403629 610 ntBASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 DGAT2L7P-201ENST00000602462 744 ntBASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 AC126755.5-201ENST00000622756 267 ntBASIC17.25■□□□□ 0.35
CRAMP1Q96RY5 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms