Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 IL9RP3-201ENST00000442856 1674 ntBASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 BRD7P5-201ENST00000299197 1822 ntBASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 AC018638.5-201ENST00000450885 754 ntBASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 MYADML-201ENST00000474610 2147 ntBASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 RNA5SP417-201ENST00000516459 108 ntBASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 HERC2P11-201ENST00000562845 725 ntBASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 AC141586.1-203ENST00000567242 366 ntBASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 AC100756.2-201ENST00000569537 736 ntBASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 AC138466.5-201ENST00000624002 808 ntBASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 TEKT4P2-202ENST00000559466 1312 ntBASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNGAP1Q96PV0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 AL357563.1-201ENST00000404728 395 ntBASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 AC004837.1-201ENST00000446267 564 ntBASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 DPY19L2P5-201ENST00000456300 331 ntBASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 SIGLEC22P-201ENST00000599104 714 ntBASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 AC127024.7-201ENST00000625101 200 ntBASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 PLS3-210ENST00000626746 216 ntTSL 4 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNGAP1Q96PV0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms