Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 BAK1P1-201ENST00000317045 636 ntBASIC16.85■□□□□ 0.29
TRIM47Q96LD4 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 AL357563.1-201ENST00000404728 395 ntBASIC16.85■□□□□ 0.29
TRIM47Q96LD4 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 ORAOV1P1-201ENST00000503108 395 ntBASIC16.85■□□□□ 0.29
TRIM47Q96LD4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 NUDT4P2-201ENST00000578341 546 ntBASIC16.85■□□□□ 0.29
TRIM47Q96LD4 RN7SL596P-201ENST00000582123 288 ntBASIC16.85■□□□□ 0.29
TRIM47Q96LD4 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 KRT8P31-201ENST00000504812 1408 ntBASIC16.85■□□□□ 0.29
TRIM47Q96LD4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 XBP1P1-201ENST00000436573 652 ntBASIC16.84■□□□□ 0.29
TRIM47Q96LD4 AC004837.1-201ENST00000446267 564 ntBASIC16.84■□□□□ 0.29
TRIM47Q96LD4 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 DNM1P51-201ENST00000558149 522 ntBASIC16.84■□□□□ 0.29
TRIM47Q96LD4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 AC006158.1-201ENST00000610661 249 ntBASIC16.84■□□□□ 0.29
TRIM47Q96LD4 AP001527.2-201ENST00000614441 631 ntBASIC16.84■□□□□ 0.29
TRIM47Q96LD4 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 AC018629.1-201ENST00000623381 1736 ntBASIC16.84■□□□□ 0.29
TRIM47Q96LD4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM47Q96LD4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM47Q96LD4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.29
TRIM47Q96LD4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
TRIM47Q96LD4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.83■□□□□ 0.29
TRIM47Q96LD4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM47Q96LD4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM47Q96LD4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms