Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPGRQ92834 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPGRQ92834 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPGRQ92834 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPGRQ92834 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
RPGRQ92834 DBET-201ENST00000630918 3363 ntBASIC17.52■□□□□ 0.4
RPGRQ92834 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPGRQ92834 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPGRQ92834 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.52■□□□□ 0.4
RPGRQ92834 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPGRQ92834 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPGRQ92834 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RPGRQ92834 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPGRQ92834 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.52■□□□□ 0.4
RPGRQ92834 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPGRQ92834 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC17.52■□□□□ 0.4
RPGRQ92834 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC17.52■□□□□ 0.4
RPGRQ92834 AC026470.1-201ENST00000478038 846 ntBASIC17.52■□□□□ 0.4
RPGRQ92834 AC100858.1-201ENST00000514059 1228 ntBASIC17.52■□□□□ 0.4
RPGRQ92834 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC17.52■□□□□ 0.4
RPGRQ92834 FOXN3-AS2-201ENST00000554071 1262 ntBASIC17.52■□□□□ 0.4
RPGRQ92834 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.52■□□□□ 0.4
RPGRQ92834 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC17.52■□□□□ 0.4
RPGRQ92834 RN7SL455P-201ENST00000580629 282 ntBASIC17.52■□□□□ 0.4
RPGRQ92834 AC006548.2-201ENST00000605217 529 ntBASIC17.52■□□□□ 0.4
RPGRQ92834 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPGRQ92834 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPGRQ92834 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.52■□□□□ 0.4
RPGRQ92834 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPGRQ92834 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.52■□□□□ 0.4
RPGRQ92834 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPGRQ92834 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
RPGRQ92834 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPGRQ92834 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
RPGRQ92834 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.52■□□□□ 0.39
RPGRQ92834 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPGRQ92834 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.52■□□□□ 0.39
RPGRQ92834 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RPGRQ92834 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPGRQ92834 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPGRQ92834 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC17.52■□□□□ 0.39
RPGRQ92834 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPGRQ92834 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RPGRQ92834 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.51■□□□□ 0.39
RPGRQ92834 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 RPL13AP3-202ENST00000494676 1473 ntBASIC17.51■□□□□ 0.39
RPGRQ92834 AC007952.5-201ENST00000572818 1486 ntBASIC17.51■□□□□ 0.39
RPGRQ92834 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
RPGRQ92834 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RPGRQ92834 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.51■□□□□ 0.39
RPGRQ92834 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 MIR566-201ENST00000385187 94 ntBASIC17.51■□□□□ 0.39
RPGRQ92834 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
RPGRQ92834 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC17.51■□□□□ 0.39
RPGRQ92834 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC17.51■□□□□ 0.39
RPGRQ92834 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.51■□□□□ 0.39
RPGRQ92834 BPIFB5P-201ENST00000457066 1099 ntBASIC17.51■□□□□ 0.39
RPGRQ92834 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC17.51■□□□□ 0.39
RPGRQ92834 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC17.51■□□□□ 0.39
RPGRQ92834 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RPGRQ92834 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RPGRQ92834 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.51■□□□□ 0.39
RPGRQ92834 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
RPGRQ92834 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 AP001527.2-201ENST00000614441 631 ntBASIC17.51■□□□□ 0.39
RPGRQ92834 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RPGRQ92834 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.51■□□□□ 0.39
RPGRQ92834 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.51■□□□□ 0.39
RPGRQ92834 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC17.51■□□□□ 0.39
RPGRQ92834 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
RPGRQ92834 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPGRQ92834 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPGRQ92834 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPGRQ92834 KRT8P43-201ENST00000406052 1458 ntBASIC17.5■□□□□ 0.39
RPGRQ92834 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC17.5■□□□□ 0.39
RPGRQ92834 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.5■□□□□ 0.39
RPGRQ92834 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPGRQ92834 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPGRQ92834 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RPGRQ92834 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPGRQ92834 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
RPGRQ92834 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPGRQ92834 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.5■□□□□ 0.39
RPGRQ92834 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPGRQ92834 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms