Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 HLA-J-204ENST00000495278 958 ntBASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 AP000346.4-201ENST00000614827 381 ntBASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 AC004899.1-201ENST00000424687 1714 ntBASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 AC018629.1-201ENST00000623381 1736 ntBASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 FAM90A12P-201ENST00000519497 2375 ntBASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 FAM90A24P-201ENST00000520792 2369 ntBASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 AC072061.1-201ENST00000569710 2234 ntBASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDH19Q8TAB3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 XBP1P1-201ENST00000436573 652 ntBASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 AL023803.2-201ENST00000620080 638 ntBASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 AL591471.1-201ENST00000621855 229 ntBASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 AL008638.5-201ENST00000623814 1298 ntBASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 AC092299.1-201ENST00000632679 757 ntBASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH19Q8TAB3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms