Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 RPL7P3-201ENST00000441388 714 ntBASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 CHMP1AP1-201ENST00000445563 662 ntBASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 CICP12-201ENST00000455801 843 ntBASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 CROCCP4-201ENST00000457096 498 ntBASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 AC027237.1-201ENST00000560942 655 ntBASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 AC106886.1-201ENST00000568660 600 ntBASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 AC012645.4-201ENST00000610691 1061 ntBASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 AHCYP2-201ENST00000430630 1300 ntBASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 PDIA3P1-201ENST00000471856 1510 ntBASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF439Q8NDP4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12□□□□□ -0.49
ZNF439Q8NDP4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 CNN2P10-201ENST00000443067 918 ntBASIC12□□□□□ -0.49
ZNF439Q8NDP4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 AL355994.2-201ENST00000447882 704 ntBASIC12□□□□□ -0.49
ZNF439Q8NDP4 AL035414.1-201ENST00000451327 857 ntBASIC12□□□□□ -0.49
ZNF439Q8NDP4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 PPY2P-201ENST00000582808 702 ntBASIC12□□□□□ -0.49
ZNF439Q8NDP4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF439Q8NDP4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12□□□□□ -0.49
ZNF439Q8NDP4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms