Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
DENND4AQ7Z401 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.38□□□□□ -0.11
DENND4AQ7Z401 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 AC099063.4-201ENST00000641099 1602 ntBASIC14.38□□□□□ -0.11
DENND4AQ7Z401 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 VENTXP4-201ENST00000449029 958 ntBASIC14.38□□□□□ -0.11
DENND4AQ7Z401 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 BAK1P2-201ENST00000532665 631 ntBASIC14.38□□□□□ -0.11
DENND4AQ7Z401 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 AC110057.1-201ENST00000636031 898 ntBASIC14.38□□□□□ -0.11
DENND4AQ7Z401 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 DBET-201ENST00000630918 3363 ntBASIC14.38□□□□□ -0.11
DENND4AQ7Z401 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 SALL4P6-201ENST00000429385 1691 ntBASIC14.38□□□□□ -0.11
DENND4AQ7Z401 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 AC008536.3-201ENST00000623282 1599 ntBASIC14.38□□□□□ -0.11
DENND4AQ7Z401 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 AC064850.1-201ENST00000413279 1398 ntBASIC14.38□□□□□ -0.11
DENND4AQ7Z401 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 PHBP10-201ENST00000416467 784 ntBASIC14.38□□□□□ -0.11
DENND4AQ7Z401 PGK1P2-201ENST00000431702 1214 ntBASIC14.38□□□□□ -0.11
DENND4AQ7Z401 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 BMF-206ENST00000558774 671 ntTSL 3 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 NEK4P3-201ENST00000604859 544 ntBASIC14.38□□□□□ -0.11
DENND4AQ7Z401 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC14.38□□□□□ -0.11
DENND4AQ7Z401 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 MIR1307-201ENST00000408840 149 ntBASIC14.37□□□□□ -0.11
DENND4AQ7Z401 AC133141.1-201ENST00000443015 339 ntBASIC14.37□□□□□ -0.11
DENND4AQ7Z401 CDK4P1-201ENST00000454213 828 ntBASIC14.37□□□□□ -0.11
DENND4AQ7Z401 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 AC005746.3-201ENST00000614751 393 ntBASIC14.37□□□□□ -0.11
DENND4AQ7Z401 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DENND4AQ7Z401 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
DENND4AQ7Z401 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.36□□□□□ -0.11
DENND4AQ7Z401 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DENND4AQ7Z401 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
DENND4AQ7Z401 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DENND4AQ7Z401 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DENND4AQ7Z401 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
DENND4AQ7Z401 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
DENND4AQ7Z401 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DENND4AQ7Z401 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
DENND4AQ7Z401 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.36□□□□□ -0.11
DENND4AQ7Z401 RN7SL684P-201ENST00000465665 294 ntBASIC14.36□□□□□ -0.11
DENND4AQ7Z401 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms