Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
ATP7AQ04656 AC113367.3-201ENST00000508316 1912 ntBASIC20.59■□□□□ 0.89
ATP7AQ04656 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATP7AQ04656 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ATP7AQ04656 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
ATP7AQ04656 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP7AQ04656 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP7AQ04656 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP7AQ04656 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP7AQ04656 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ATP7AQ04656 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP7AQ04656 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP7AQ04656 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP7AQ04656 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP7AQ04656 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP7AQ04656 AHCYP3-201ENST00000420053 1279 ntBASIC20.58■□□□□ 0.89
ATP7AQ04656 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC20.58■□□□□ 0.89
ATP7AQ04656 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP7AQ04656 MARK2P17-201ENST00000498560 841 ntBASIC20.58■□□□□ 0.89
ATP7AQ04656 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC20.58■□□□□ 0.89
ATP7AQ04656 AC011431.1-201ENST00000512971 230 ntBASIC20.58■□□□□ 0.89
ATP7AQ04656 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP7AQ04656 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC20.58■□□□□ 0.89
ATP7AQ04656 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC20.58■□□□□ 0.89
ATP7AQ04656 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP7AQ04656 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ATP7AQ04656 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP7AQ04656 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP7AQ04656 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP7AQ04656 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP7AQ04656 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ATP7AQ04656 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP7AQ04656 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP7AQ04656 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP7AQ04656 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP7AQ04656 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
ATP7AQ04656 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC20.58■□□□□ 0.88
ATP7AQ04656 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP7AQ04656 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATP7AQ04656 GUCY2EP-203ENST00000531117 1918 ntBASIC20.58■□□□□ 0.88
ATP7AQ04656 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
ATP7AQ04656 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP7AQ04656 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
ATP7AQ04656 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP7AQ04656 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATP7AQ04656 KRT19P4-201ENST00000443208 943 ntBASIC20.58■□□□□ 0.88
ATP7AQ04656 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC20.58■□□□□ 0.88
ATP7AQ04656 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC20.58■□□□□ 0.88
ATP7AQ04656 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
ATP7AQ04656 STK16-202ENST00000409260 1493 ntTSL 5 BASIC20.58■□□□□ 0.88
ATP7AQ04656 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATP7AQ04656 AC132872.4-202ENST00000622924 2756 ntBASIC20.57■□□□□ 0.88
ATP7AQ04656 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP7AQ04656 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP7AQ04656 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP7AQ04656 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP7AQ04656 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP7AQ04656 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ATP7AQ04656 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC20.57■□□□□ 0.88
ATP7AQ04656 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP7AQ04656 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP7AQ04656 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP7AQ04656 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP7AQ04656 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ATP7AQ04656 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC20.57■□□□□ 0.88
ATP7AQ04656 PTN-202ENST00000393083 1599 ntTSL 5 BASIC20.57■□□□□ 0.88
ATP7AQ04656 AC012617.1-204ENST00000586340 2305 ntBASIC20.57■□□□□ 0.88
ATP7AQ04656 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP7AQ04656 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ATP7AQ04656 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP7AQ04656 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP7AQ04656 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ATP7AQ04656 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP7AQ04656 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP7AQ04656 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
ATP7AQ04656 AC008494.1-201ENST00000497612 796 ntBASIC20.57■□□□□ 0.88
ATP7AQ04656 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC20.57■□□□□ 0.88
ATP7AQ04656 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC20.57■□□□□ 0.88
ATP7AQ04656 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP7AQ04656 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP7AQ04656 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP7AQ04656 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ATP7AQ04656 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ATP7AQ04656 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP7AQ04656 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP7AQ04656 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP7AQ04656 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP7AQ04656 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP7AQ04656 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP7AQ04656 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP7AQ04656 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP7AQ04656 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
ATP7AQ04656 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ATP7AQ04656 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP7AQ04656 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC20.56■□□□□ 0.88
ATP7AQ04656 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP7AQ04656 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP7AQ04656 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP7AQ04656 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP7AQ04656 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms