Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CDKL1Q00532 TUBB8P4-201ENST00000511806 1324 ntBASIC14.22□□□□□ -0.13
CDKL1Q00532 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.22□□□□□ -0.13
CDKL1Q00532 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CDKL1Q00532 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDKL1Q00532 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.22□□□□□ -0.13
CDKL1Q00532 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.22□□□□□ -0.13
CDKL1Q00532 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
CDKL1Q00532 U91328.1-201ENST00000437528 223 ntBASIC14.22□□□□□ -0.13
CDKL1Q00532 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.22□□□□□ -0.13
CDKL1Q00532 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.22□□□□□ -0.13
CDKL1Q00532 AP006547.1-201ENST00000563435 692 ntBASIC14.22□□□□□ -0.13
CDKL1Q00532 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CDKL1Q00532 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.22□□□□□ -0.13
CDKL1Q00532 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.22□□□□□ -0.13
CDKL1Q00532 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.22□□□□□ -0.13
CDKL1Q00532 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.22□□□□□ -0.13
CDKL1Q00532 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CDKL1Q00532 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CDKL1Q00532 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CDKL1Q00532 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CDKL1Q00532 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
CDKL1Q00532 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
CDKL1Q00532 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 AC073548.1-201ENST00000624088 1882 ntBASIC14.21□□□□□ -0.13
CDKL1Q00532 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.21□□□□□ -0.13
CDKL1Q00532 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.21□□□□□ -0.13
CDKL1Q00532 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CDKL1Q00532 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.21□□□□□ -0.13
CDKL1Q00532 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CDKL1Q00532 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.21□□□□□ -0.13
CDKL1Q00532 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.21□□□□□ -0.13
CDKL1Q00532 AC079178.1-201ENST00000420915 656 ntBASIC14.21□□□□□ -0.13
CDKL1Q00532 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.21□□□□□ -0.13
CDKL1Q00532 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.21□□□□□ -0.13
CDKL1Q00532 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.21□□□□□ -0.13
CDKL1Q00532 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.21□□□□□ -0.13
CDKL1Q00532 AC104989.1-201ENST00000519711 778 ntBASIC14.21□□□□□ -0.13
CDKL1Q00532 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.21□□□□□ -0.13
CDKL1Q00532 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CDKL1Q00532 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CDKL1Q00532 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CDKL1Q00532 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDKL1Q00532 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.21□□□□□ -0.13
CDKL1Q00532 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDKL1Q00532 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDKL1Q00532 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDKL1Q00532 AL118506.1-201ENST00000601296 3082 ntBASIC14.21□□□□□ -0.14
CDKL1Q00532 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CDKL1Q00532 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDKL1Q00532 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDKL1Q00532 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDKL1Q00532 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDKL1Q00532 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CDKL1Q00532 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDKL1Q00532 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDKL1Q00532 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDKL1Q00532 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms