Protein–RNA interactions for Protein: P82279

CRB1, Protein crumbs homolog 1, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRB1P82279 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRB1P82279 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRB1P82279 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRB1P82279 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRB1P82279 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.69■□□□□ 0.58
CRB1P82279 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CRB1P82279 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
CRB1P82279 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CRB1P82279 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC18.69■□□□□ 0.58
CRB1P82279 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC18.69■□□□□ 0.58
CRB1P82279 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC18.69■□□□□ 0.58
CRB1P82279 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC18.69■□□□□ 0.58
CRB1P82279 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC18.69■□□□□ 0.58
CRB1P82279 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC18.69■□□□□ 0.58
CRB1P82279 AC026336.4-201ENST00000624565 1050 ntBASIC18.69■□□□□ 0.58
CRB1P82279 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC18.69■□□□□ 0.58
CRB1P82279 ESR1-214ENST00000638569 132 ntTSL 5 BASIC18.69■□□□□ 0.58
CRB1P82279 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CRB1P82279 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CRB1P82279 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CRB1P82279 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.69■□□□□ 0.58
CRB1P82279 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CRB1P82279 TBC1D27-202ENST00000424239 1573 ntBASIC18.69■□□□□ 0.58
CRB1P82279 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.69■□□□□ 0.58
CRB1P82279 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRB1P82279 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CRB1P82279 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC18.68■□□□□ 0.58
CRB1P82279 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.68■□□□□ 0.58
CRB1P82279 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.68■□□□□ 0.58
CRB1P82279 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.68■□□□□ 0.58
CRB1P82279 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 SSR4-202ENST00000370085 526 ntTSL 2 BASIC18.68■□□□□ 0.58
CRB1P82279 OR2W2P-201ENST00000406313 909 ntBASIC18.68■□□□□ 0.58
CRB1P82279 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC18.68■□□□□ 0.58
CRB1P82279 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC18.68■□□□□ 0.58
CRB1P82279 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC18.68■□□□□ 0.58
CRB1P82279 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC18.68■□□□□ 0.58
CRB1P82279 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC18.68■□□□□ 0.58
CRB1P82279 HNRNPA1P56-201ENST00000505767 954 ntBASIC18.68■□□□□ 0.58
CRB1P82279 AC092612.1-201ENST00000514501 998 ntBASIC18.68■□□□□ 0.58
CRB1P82279 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC18.68■□□□□ 0.58
CRB1P82279 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC18.68■□□□□ 0.58
CRB1P82279 AC004686.1-201ENST00000605113 538 ntBASIC18.68■□□□□ 0.58
CRB1P82279 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC18.68■□□□□ 0.58
CRB1P82279 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC18.68■□□□□ 0.58
CRB1P82279 BX640514.1-201ENST00000583223 1918 ntBASIC18.68■□□□□ 0.58
CRB1P82279 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CRB1P82279 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CRB1P82279 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.68■□□□□ 0.58
CRB1P82279 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CRB1P82279 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRB1P82279 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CRB1P82279 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.68■□□□□ 0.58
CRB1P82279 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.67■□□□□ 0.58
CRB1P82279 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CRB1P82279 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CRB1P82279 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CRB1P82279 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC18.67■□□□□ 0.58
CRB1P82279 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
CRB1P82279 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CRB1P82279 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CRB1P82279 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC18.67■□□□□ 0.58
CRB1P82279 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms