Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.73□□□□□ -0.37
SEC61A1P61619 KRT90P-201ENST00000549264 1064 ntBASIC12.73□□□□□ -0.37
SEC61A1P61619 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.73□□□□□ -0.37
SEC61A1P61619 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.73□□□□□ -0.37
SEC61A1P61619 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.73□□□□□ -0.37
SEC61A1P61619 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.73□□□□□ -0.37
SEC61A1P61619 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.73□□□□□ -0.37
SEC61A1P61619 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.73□□□□□ -0.37
SEC61A1P61619 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.73□□□□□ -0.37
SEC61A1P61619 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.73□□□□□ -0.37
SEC61A1P61619 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SEC61A1P61619 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SEC61A1P61619 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SEC61A1P61619 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.73□□□□□ -0.37
SEC61A1P61619 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SEC61A1P61619 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SEC61A1P61619 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.73□□□□□ -0.37
SEC61A1P61619 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.72□□□□□ -0.37
SEC61A1P61619 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SEC61A1P61619 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 FAM90A12P-201ENST00000519497 2375 ntBASIC12.72□□□□□ -0.37
SEC61A1P61619 FAM90A24P-201ENST00000520792 2369 ntBASIC12.72□□□□□ -0.37
SEC61A1P61619 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.72□□□□□ -0.37
SEC61A1P61619 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SEC61A1P61619 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.72□□□□□ -0.37
SEC61A1P61619 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 RPL7P3-201ENST00000441388 714 ntBASIC12.72□□□□□ -0.37
SEC61A1P61619 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.72□□□□□ -0.37
SEC61A1P61619 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SEC61A1P61619 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.72□□□□□ -0.37
SEC61A1P61619 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.72□□□□□ -0.37
SEC61A1P61619 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.72□□□□□ -0.37
SEC61A1P61619 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
SEC61A1P61619 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
SEC61A1P61619 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SEC61A1P61619 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SEC61A1P61619 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SEC61A1P61619 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.72□□□□□ -0.37
SEC61A1P61619 INE2-201ENST00000630399 1874 ntBASIC12.72□□□□□ -0.37
SEC61A1P61619 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
SEC61A1P61619 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.72□□□□□ -0.37
SEC61A1P61619 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SEC61A1P61619 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.71□□□□□ -0.37
SEC61A1P61619 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61A1P61619 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61A1P61619 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61A1P61619 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61A1P61619 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SEC61A1P61619 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SEC61A1P61619 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.71□□□□□ -0.37
SEC61A1P61619 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61A1P61619 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SEC61A1P61619 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.71□□□□□ -0.37
SEC61A1P61619 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61A1P61619 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61A1P61619 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
SEC61A1P61619 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.71□□□□□ -0.37
SEC61A1P61619 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61A1P61619 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
SEC61A1P61619 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61A1P61619 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61A1P61619 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61A1P61619 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SEC61A1P61619 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61A1P61619 HLA-V-201ENST00000429037 534 ntBASIC12.71□□□□□ -0.37
SEC61A1P61619 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.71□□□□□ -0.37
SEC61A1P61619 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms