Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCR4P61073 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CXCR4P61073 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 VENTXP1-201ENST00000569334 2716 ntBASIC13.16□□□□□ -0.3
CXCR4P61073 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCR4P61073 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
CXCR4P61073 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCR4P61073 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CXCR4P61073 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCR4P61073 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.15□□□□□ -0.3
CXCR4P61073 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.15□□□□□ -0.3
CXCR4P61073 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.15□□□□□ -0.3
CXCR4P61073 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CXCR4P61073 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CXCR4P61073 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 MEX3B-202ENST00000558133 4333 ntBASIC13.15□□□□□ -0.3
CXCR4P61073 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CXCR4P61073 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CXCR4P61073 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCR4P61073 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CXCR4P61073 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCR4P61073 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCR4P61073 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCR4P61073 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.15□□□□□ -0.3
CXCR4P61073 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CXCR4P61073 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.15□□□□□ -0.3
CXCR4P61073 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.15□□□□□ -0.3
CXCR4P61073 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCR4P61073 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.15□□□□□ -0.3
CXCR4P61073 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.15□□□□□ -0.3
CXCR4P61073 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCR4P61073 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 PI4KAP2-201ENST00000360806 2080 ntBASIC13.15□□□□□ -0.3
CXCR4P61073 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CXCR4P61073 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CXCR4P61073 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCR4P61073 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
CXCR4P61073 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCR4P61073 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCR4P61073 AC008620.2-201ENST00000510294 1569 ntBASIC13.15□□□□□ -0.3
CXCR4P61073 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CXCR4P61073 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CXCR4P61073 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CXCR4P61073 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
CXCR4P61073 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
CXCR4P61073 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.14□□□□□ -0.31
CXCR4P61073 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.14□□□□□ -0.31
CXCR4P61073 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC13.14□□□□□ -0.31
CXCR4P61073 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.14□□□□□ -0.31
CXCR4P61073 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.14□□□□□ -0.31
CXCR4P61073 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.14□□□□□ -0.31
CXCR4P61073 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CXCR4P61073 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.14□□□□□ -0.31
CXCR4P61073 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.14□□□□□ -0.31
CXCR4P61073 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.14□□□□□ -0.31
CXCR4P61073 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 AC073862.5-201ENST00000624129 2027 ntBASIC13.14□□□□□ -0.31
CXCR4P61073 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.14□□□□□ -0.31
CXCR4P61073 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms