Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 AC010141.1-201ENST00000411585 623 ntBASIC16.55■□□□□ 0.24
CHMP4BP1P59074 ISCA2P1-201ENST00000425548 448 ntBASIC16.55■□□□□ 0.24
CHMP4BP1P59074 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 MIR4722-201ENST00000578292 60 ntBASIC16.55■□□□□ 0.24
CHMP4BP1P59074 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 SPCS2P2-201ENST00000603270 608 ntBASIC16.55■□□□□ 0.24
CHMP4BP1P59074 MIR7845-201ENST00000618396 99 ntBASIC16.55■□□□□ 0.24
CHMP4BP1P59074 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 AC069218.1-201ENST00000435269 762 ntBASIC16.54■□□□□ 0.24
CHMP4BP1P59074 AC012441.2-201ENST00000444843 739 ntBASIC16.54■□□□□ 0.24
CHMP4BP1P59074 MAGEA5-201ENST00000446757 942 ntBASIC16.54■□□□□ 0.24
CHMP4BP1P59074 AC234782.1-201ENST00000451950 919 ntBASIC16.54■□□□□ 0.24
CHMP4BP1P59074 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 AC009884.2-201ENST00000603110 324 ntBASIC16.54■□□□□ 0.24
CHMP4BP1P59074 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 AC003102.2-201ENST00000589195 1469 ntBASIC16.54■□□□□ 0.24
CHMP4BP1P59074 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHMP4BP1P59074 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 AC006480.2-201ENST00000609770 1337 ntBASIC16.53■□□□□ 0.24
CHMP4BP1P59074 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms