Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.66□□□□□ -0.22
CLK1P49759 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.66□□□□□ -0.22
CLK1P49759 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.66□□□□□ -0.22
CLK1P49759 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.66□□□□□ -0.22
CLK1P49759 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.66□□□□□ -0.22
CLK1P49759 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
CLK1P49759 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CLK1P49759 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.66□□□□□ -0.22
CLK1P49759 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CLK1P49759 AL512384.1-201ENST00000406683 331 ntBASIC13.66□□□□□ -0.22
CLK1P49759 AC004945.1-201ENST00000416738 983 ntBASIC13.66□□□□□ -0.22
CLK1P49759 NME2P1-201ENST00000426182 414 ntBASIC13.66□□□□□ -0.22
CLK1P49759 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.66□□□□□ -0.22
CLK1P49759 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.66□□□□□ -0.22
CLK1P49759 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 RN7SL837P-201ENST00000463010 287 ntBASIC13.66□□□□□ -0.22
CLK1P49759 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CLK1P49759 AC068587.3-201ENST00000526613 355 ntBASIC13.66□□□□□ -0.22
CLK1P49759 MIR5189-201ENST00000577370 114 ntBASIC13.66□□□□□ -0.22
CLK1P49759 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.66□□□□□ -0.22
CLK1P49759 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.66□□□□□ -0.22
CLK1P49759 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLK1P49759 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.66□□□□□ -0.22
CLK1P49759 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.66□□□□□ -0.22
CLK1P49759 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.66□□□□□ -0.22
CLK1P49759 AC083964.2-201ENST00000623988 2396 ntBASIC13.66□□□□□ -0.22
CLK1P49759 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.66□□□□□ -0.22
CLK1P49759 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.66□□□□□ -0.22
CLK1P49759 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.66□□□□□ -0.22
CLK1P49759 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLK1P49759 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CLK1P49759 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.65□□□□□ -0.22
CLK1P49759 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CLK1P49759 AL137783.1-201ENST00000623494 1896 ntBASIC13.65□□□□□ -0.22
CLK1P49759 INE2-201ENST00000630399 1874 ntBASIC13.65□□□□□ -0.22
CLK1P49759 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CLK1P49759 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.65□□□□□ -0.22
CLK1P49759 AL157414.3-201ENST00000624276 1954 ntBASIC13.65□□□□□ -0.22
CLK1P49759 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.65□□□□□ -0.22
CLK1P49759 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CLK1P49759 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CLK1P49759 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.65□□□□□ -0.22
CLK1P49759 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CLK1P49759 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.65□□□□□ -0.22
CLK1P49759 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLK1P49759 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.65□□□□□ -0.22
CLK1P49759 AC005229.1-201ENST00000392885 409 ntBASIC13.65□□□□□ -0.22
CLK1P49759 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.65□□□□□ -0.22
CLK1P49759 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.65□□□□□ -0.22
CLK1P49759 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
CLK1P49759 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLK1P49759 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.65□□□□□ -0.22
CLK1P49759 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.65□□□□□ -0.22
CLK1P49759 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.65□□□□□ -0.22
CLK1P49759 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.65□□□□□ -0.22
CLK1P49759 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.65□□□□□ -0.22
CLK1P49759 AP005018.1-201ENST00000525475 301 ntBASIC13.65□□□□□ -0.22
CLK1P49759 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
CLK1P49759 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms